Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BATR1942_RS01725 Genome accession   NC_014639
Coordinates   384339..385130 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus 1942     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 379339..390130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BATR1942_RS01700 (BATR1942_01795) - 380183..381196 (+) 1014 WP_087941833.1 FecCD family ABC transporter permease -
  BATR1942_RS01705 (BATR1942_01800) - 381313..382194 (+) 882 WP_004430585.1 PhzF family phenazine biosynthesis isomerase -
  BATR1942_RS01710 (BATR1942_01805) - 382275..382859 (+) 585 WP_004430586.1 nitroreductase family protein -
  BATR1942_RS01715 (BATR1942_01810) - 382898..383089 (-) 192 WP_004430587.1 YfhD family protein -
  BATR1942_RS20585 (BATR1942_01815) - 383168..383278 (-) 111 WP_003223230.1 YfhE family protein -
  BATR1942_RS01720 (BATR1942_01820) - 383337..384248 (-) 912 WP_004430588.1 TIGR01777 family oxidoreductase -
  BATR1942_RS01725 (BATR1942_01825) recX 384339..385130 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  BATR1942_RS01730 (BATR1942_01830) - 385138..385464 (+) 327 WP_004430592.1 YfhH family protein -
  BATR1942_RS01735 (BATR1942_01835) - 385600..386799 (+) 1200 WP_004430594.1 MFS transporter -
  BATR1942_RS01740 (BATR1942_01840) - 386840..386992 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  BATR1942_RS01745 (BATR1942_01845) - 387109..387378 (+) 270 WP_004430597.1 YfhJ family protein -
  BATR1942_RS01750 (BATR1942_01850) - 387506..388042 (+) 537 WP_004430598.1 SH3 domain-containing protein -
  BATR1942_RS01755 (BATR1942_01855) - 388183..388530 (+) 348 WP_004430600.1 SdpI family protein -
  BATR1942_RS01760 (BATR1942_01860) - 388517..389383 (+) 867 WP_004430601.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=38743 BATR1942_RS01725 WP_004430590.1 384339..385130(+) (recX) [Bacillus atrophaeus 1942]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=38743 BATR1942_RS01725 WP_004430590.1 384339..385130(+) (recX) [Bacillus atrophaeus 1942]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAGATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGTGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAAGAAGAAAGAAATATCAGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACACTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATTGGAAAAATCCTGAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TTTGCAGCGTAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCGTTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGTTCCTACGAGAGCAAGATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATTGACCAATTTCTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829

Multiple sequence alignment