Detailed information NTG0387403

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FOB71_RS22180
• Genome accession: NZ_CP044069
• Coordinates: 3060292..3061299 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FDAARGOS_663
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3055292..3066299

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB71_RS22160 (FOB71_22155)	metJ	3055398..3055715 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
FOB71_RS22165 (FOB71_22160)	-	3055801..3057078 (-)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
FOB71_RS22170 (FOB71_22165)	rpmE	3057357..3057578 (-)	222	WP_011079336.1	50S ribosomal protein L31	-
FOB71_RS22175 (FOB71_22170)	priA	3057859..3060063 (+)	2205	WP_026050203.1	primosomal protein N'	-
FOB71_RS22180 (FOB71_22175)	cytR	3060292..3061299 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
FOB71_RS22185 (FOB71_22180)	-	3061407..3061964 (+)	558	WP_017419640.1	SPOR domain-containing protein	-
FOB71_RS22190 (FOB71_22185)	hslV	3062114..3062668 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
FOB71_RS22195 (FOB71_22190)	hslU	3062696..3064027 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
FOB71_RS22200 (FOB71_22195)	-	3064192..3065109 (+)	918	WP_017419638.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FOB71_RS22205 (FOB71_22200)	rraA	3065185..3065697 (+)	513	WP_017419637.1	ribonuclease E activity regulator RraA	-
FOB71_RS22210 (FOB71_22205)	zapB	3065919..3066161 (+)	243	WP_017419636.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=387403 FOB71_RS22180 WP_011079334.1 3060292..3061299(+) (cytR) [Vibrio vulnificus strain FDAARGOS_663]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=387403 FOB71_RS22180 WP_011079334.1 3060292..3061299(+) (cytR) [Vibrio vulnificus strain FDAARGOS_663]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCTGCCTTTGAAGCGGTGAACTACCTGACTCAACTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCCGGCATCACAATGAACCCACAATATT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGATGCGCCAACCGCC
GTCTTCTGTCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCACCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875