Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | HHJ29_RS05730 | Genome accession | NZ_CP051725 |
| Coordinates | 1197228..1197743 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain SCU-112 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1192228..1202743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ29_RS05680 (HHJ29_05680) | csrA | 1192947..1193132 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| HHJ29_RS05715 (HHJ29_05715) | yqaB | 1194458..1195024 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| HHJ29_RS05720 (HHJ29_05720) | yqaA | 1195021..1195449 (+) | 429 | WP_001287462.1 | YqaA family protein | - |
| HHJ29_RS05725 (HHJ29_05725) | gshA | 1195522..1197078 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| HHJ29_RS05730 (HHJ29_05730) | luxS | 1197228..1197743 (+) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| HHJ29_RS05735 (HHJ29_05735) | - | 1197792..1198904 (-) | 1113 | WP_000638135.1 | ATP-binding protein | - |
| HHJ29_RS05740 (HHJ29_05740) | - | 1198901..1199598 (-) | 698 | Protein_1139 | RNA ligase family protein | - |
| HHJ29_RS05745 (HHJ29_05745) | emrB | 1199856..1201394 (-) | 1539 | WP_001305258.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| HHJ29_RS05750 (HHJ29_05750) | emrA | 1201411..1202583 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=387402 HHJ29_RS05730 WP_001130208.1 1197228..1197743(+) (luxS) [Escherichia coli strain SCU-112]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=387402 HHJ29_RS05730 WP_001130208.1 1197228..1197743(+) (luxS) [Escherichia coli strain SCU-112]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACTTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACTTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |