Detailed information NTG0387378

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ29_RS00910
• Genome accession: NZ_CP051725
• Coordinates: 193298..194281 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-112
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 188298..199281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ29_RS00890 (HHJ29_00890)	dppA	189442..191049 (+)	1608	WP_169063319.1	dipeptide ABC transporter substrate-binding protein DppA	-
HHJ29_RS00895 (HHJ29_00895)	-	191111..191338 (-)	228	WP_000198577.1	hypothetical protein	-
HHJ29_RS00900 (HHJ29_00900)	dppB	191356..192375 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ29_RS00905 (HHJ29_00905)	dppC	192385..193287 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ29_RS00910 (HHJ29_00910)	amiE	193298..194281 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ29_RS00915 (HHJ29_00915)	dppF	194278..195282 (+)	1005	WP_001620617.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ29_RS00920 (HHJ29_00920)	yhjV	195312..196583 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HHJ29_RS00925 (HHJ29_00925)	-	197059..197166 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ29_RS00930 (HHJ29_00930)	-	197542..197649 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=387378 HHJ29_RS00910 WP_001196477.1 193298..194281(+) (amiE) [Escherichia coli strain SCU-112]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=387378 HHJ29_RS00910 WP_001196477.1 193298..194281(+) (amiE) [Escherichia coli strain SCU-112]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404