Detailed information NTG0387330

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ31_RS12675
• Genome accession: NZ_CP051719
• Coordinates: 2630016..2630999 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-116
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2625016..2635999

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ31_RS12650 (HHJ31_12650)	-	2626166..2626273 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ31_RS12655 (HHJ31_12655)	-	2626649..2626756 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ31_RS12660 (HHJ31_12660)	-	2627131..2627238 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ31_RS12665 (HHJ31_12665)	yhjV	2627714..2628985 (+)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
HHJ31_RS12670 (HHJ31_12670)	dppF	2629015..2630019 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ31_RS12675 (HHJ31_12675)	amiE	2630016..2630999 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ31_RS12680 (HHJ31_12680)	dppC	2631010..2631912 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ31_RS12685 (HHJ31_12685)	dppB	2631922..2632941 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ31_RS12690 (HHJ31_12690)	dppA	2633092..2634699 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=387330 HHJ31_RS12675 WP_001196477.1 2630016..2630999(-) (amiE) [Escherichia coli strain SCU-116]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=387330 HHJ31_RS12675 WP_001196477.1 2630016..2630999(-) (amiE) [Escherichia coli strain SCU-116]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404