Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | FOB75_RS15860 | Genome accession | NZ_CP044062 |
| Coordinates | 3112223..3112741 (+) | Length | 172 a.a. |
| NCBI ID | WP_005462534.1 | Uniprot ID | Q87LS4 |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_667 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3107223..3117741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB75_RS15850 (FOB75_15850) | gshA | 3109958..3111526 (+) | 1569 | WP_015297257.1 | glutamate--cysteine ligase | - |
| FOB75_RS15855 (FOB75_15855) | - | 3111551..3112156 (+) | 606 | WP_068864661.1 | hypothetical protein | - |
| FOB75_RS15860 (FOB75_15860) | luxS | 3112223..3112741 (+) | 519 | WP_005462534.1 | S-ribosylhomocysteine lyase | Regulator |
| FOB75_RS15865 (FOB75_15865) | - | 3112802..3114082 (-) | 1281 | WP_005462557.1 | HlyC/CorC family transporter | - |
| FOB75_RS15870 (FOB75_15870) | - | 3114208..3115002 (-) | 795 | WP_005462565.1 | inner membrane protein YpjD | - |
| FOB75_RS15875 (FOB75_15875) | ffh | 3115215..3116597 (+) | 1383 | WP_150334547.1 | signal recognition particle protein | - |
| FOB75_RS15880 (FOB75_15880) | rpsP | 3116807..3117055 (+) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| FOB75_RS15885 (FOB75_15885) | rimM | 3117084..3117632 (+) | 549 | WP_005462552.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19033.73 Da Isoelectric Point: 4.7134
>NTDB_id=387312 FOB75_RS15860 WP_005462534.1 3112223..3112741(+) (luxS) [Vibrio parahaemolyticus strain FDAARGOS_667]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
Nucleotide
Download Length: 519 bp
>NTDB_id=387312 FOB75_RS15860 WP_005462534.1 3112223..3112741(+) (luxS) [Vibrio parahaemolyticus strain FDAARGOS_667]
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTCGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACAGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTCGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACAGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
88.889 |
99.419 |
0.884 |