Detailed information NTG0387290

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FOB75_RS11270
• Genome accession: NZ_CP044062
• Coordinates: 2233048..2234055 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FDAARGOS_667
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2228048..2239055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB75_RS11245 (FOB75_11245)	rplC	2228582..2229211 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
FOB75_RS11250 (FOB75_11250)	rpsJ	2229226..2229537 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
FOB75_RS11255 (FOB75_11255)	rpmE	2229995..2230216 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
FOB75_RS11265 (FOB75_11265)	priA	2230511..2232715 (+)	2205	WP_150334439.1	primosomal protein N'	-
FOB75_RS11270 (FOB75_11270)	cytR	2233048..2234055 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
FOB75_RS11275 (FOB75_11275)	ftsN	2234231..2234776 (+)	546	WP_005481405.1	cell division protein FtsN	-
FOB75_RS11280 (FOB75_11280)	hslV	2234941..2235492 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
FOB75_RS11285 (FOB75_11285)	hslU	2235516..2236847 (+)	1332	WP_029831555.1	HslU--HslV peptidase ATPase subunit	-
FOB75_RS11290 (FOB75_11290)	-	2237032..2237949 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FOB75_RS11295 (FOB75_11295)	rraA	2238026..2238538 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
FOB75_RS11300 (FOB75_11300)	zapB	2238643..2238885 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=387290 FOB75_RS11270 WP_005481416.1 2233048..2234055(+) (cytR) [Vibrio parahaemolyticus strain FDAARGOS_667]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=387290 FOB75_RS11270 WP_005481416.1 2233048..2234055(+) (cytR) [Vibrio parahaemolyticus strain FDAARGOS_667]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAGCTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGTCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCTGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGTGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCGGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904