Detailed information NTG0387242

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOB29_RS17895
• Genome accession: NZ_CP044059
• Coordinates: 3850678..3851856 (+)
• Length: 392 a.a.
• NCBI ID: WP_048939843.1
• Uniprot ID: -
• Organism: Bordetella hinzii strain FDAARGOS_621
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3845678..3856856

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB29_RS17870 (FOB29_17870)	-	3847536..3847919 (+)	384	WP_029578345.1	MOSC N-terminal beta barrel domain-containing protein	-
FOB29_RS17875 (FOB29_17875)	-	3847916..3849127 (-)	1212	WP_032955491.1	benzoate/H(+) symporter BenE family transporter	-
FOB29_RS17880 (FOB29_17880)	-	3849124..3849378 (-)	255	WP_029578347.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FOB29_RS17885 (FOB29_17885)	coaD	3849449..3849961 (-)	513	WP_029578348.1	pantetheine-phosphate adenylyltransferase	-
FOB29_RS17890 (FOB29_17890)	rsmD	3849985..3850605 (-)	621	WP_185843352.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOB29_RS17895 (FOB29_17895)	pilA	3850678..3851856 (+)	1179	WP_048939843.1	signal recognition particle-docking protein FtsY	Machinery gene
FOB29_RS17900 (FOB29_17900)	-	3851867..3853450 (-)	1584	WP_048940462.1	CYTH and CHAD domain-containing protein	-
FOB29_RS17905 (FOB29_17905)	phnE	3853638..3854459 (-)	822	WP_029578352.1	phosphonate ABC transporter, permease protein PhnE	-
FOB29_RS17910 (FOB29_17910)	phnE	3854456..3855319 (-)	864	WP_029578353.1	phosphonate ABC transporter, permease protein PhnE	-
FOB29_RS17915 (FOB29_17915)	phnC	3855307..3856077 (-)	771	WP_048939844.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 40808.00 Da
• Isoelectric Point: 5.8162

>NTDB_id=387242 FOB29_RS17895 WP_048939843.1 3850678..3851856(+) (pilA) [Bordetella hinzii strain FDAARGOS_621]
MFSFFKKKTPPPAAPATPAPPPEPVVQPAEPVPPPADPSPVDTAPVEPIPAQAAPLEPAAVEPAPVAPPPVPPQAAPEPV
SEPAAAAPRKASWLSRLKQGLARTGQSLGGIFVGVKVDENLFEELESALIMADAGMEATEKLLTALRARVKKERIEDPAQ
VKAALRQLLAEHLKPLERGFDLRRSQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLIEWGSR
NNVTVIAQEGGDPAAVAFDAVNAGRARGAGVVMIDTAGRLPTQLHLMEELKKIRRVIGKADAAAPHEVLLVVDGNTGQNA
LAQIRAFDAAIQLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGEGLEDLQPFVAEEFATALLAD

Nucleotide

• Length: 1179 bp

>NTDB_id=387242 FOB29_RS17895 WP_048939843.1 3850678..3851856(+) (pilA) [Bordetella hinzii strain FDAARGOS_621]
ATGTTCAGCTTCTTCAAGAAAAAGACCCCTCCGCCCGCCGCGCCGGCCACGCCCGCGCCGCCGCCGGAGCCCGTCGTCCA
GCCGGCCGAGCCCGTCCCGCCGCCCGCTGACCCGTCCCCCGTTGATACGGCCCCCGTTGAGCCGATTCCGGCTCAAGCGG
CTCCCCTTGAACCGGCGGCCGTCGAACCGGCGCCTGTCGCCCCGCCGCCCGTGCCCCCGCAGGCCGCGCCCGAGCCGGTA
TCCGAGCCGGCCGCCGCCGCGCCCAGGAAGGCGTCCTGGCTCAGCCGGCTCAAGCAGGGGCTGGCGCGCACCGGCCAGAG
CCTCGGCGGCATTTTCGTCGGCGTCAAAGTCGACGAAAACCTGTTCGAGGAGCTGGAGTCGGCCCTCATCATGGCCGATG
CGGGCATGGAGGCCACCGAAAAACTGCTCACGGCCCTGCGCGCCCGCGTCAAGAAAGAACGCATCGAGGATCCCGCCCAG
GTCAAGGCGGCGCTGCGCCAATTGCTGGCCGAGCACCTCAAGCCGCTGGAGCGCGGCTTCGACCTGCGGCGCAGCCAGCC
CCTGGTGGTGATGATTGCCGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGCAAACTGGCCCACACCTTCCAGCGCC
AGGGCGCCAGCGTGCTGCTGGCCGCGGGCGACACCTTCCGCGCCGCGGCGCGCGAGCAACTGATCGAATGGGGCAGCCGC
AACAACGTCACCGTCATCGCCCAGGAGGGCGGCGACCCGGCGGCGGTGGCGTTTGACGCCGTCAACGCGGGCCGCGCGCG
CGGCGCCGGCGTGGTCATGATAGACACCGCGGGGCGCCTGCCGACACAGCTGCACCTGATGGAAGAGCTCAAGAAAATCC
GCCGCGTCATCGGCAAGGCCGATGCGGCCGCGCCCCATGAAGTGCTGTTGGTGGTCGACGGCAATACGGGCCAGAACGCG
CTGGCCCAGATCCGCGCCTTTGACGCCGCCATCCAGCTCACCGGCCTGGTGGTGACCAAGCTGGACGGCACCGCCAAGGG
CGGCACGCTGGCCGCGGTCGCGGCCGGCAGCCAGGGCGTGCGCCCCGTGCCGGTCTATTGGATCGGCGTGGGCGAGGGGC
TCGAAGACCTGCAGCCCTTCGTGGCCGAGGAGTTCGCCACCGCGCTGTTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (188-390)

• SRP54-type protein, helical bundle domain (SRP54_N) (106-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.594	100	0.543