Detailed information NTG0387231

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOB30_RS29970
• Genome accession: NZ_CP044058
• Coordinates: 3330886..3332028 (+)
• Length: 380 a.a.
• NCBI ID: WP_006416170.1
• Uniprot ID: A0A0H3KRG3
• Organism: Burkholderia multivorans strain FDAARGOS_622
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3325886..3337028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB30_RS29940 (FOB30_29940)	-	3326317..3326922 (+)	606	WP_012212698.1	50S ribosomal protein L25/general stress protein Ctc	-
FOB30_RS29945 (FOB30_29945)	pth	3327031..3327630 (+)	600	WP_006406630.1	aminoacyl-tRNA hydrolase	-
FOB30_RS29950 (FOB30_29950)	hisC	3327742..3328809 (+)	1068	WP_006406631.1	histidinol-phosphate transaminase	-
FOB30_RS29955 (FOB30_29955)	-	3328878..3329141 (-)	264	WP_006406632.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FOB30_RS29960 (FOB30_29960)	coaD	3329449..3329946 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
FOB30_RS29965 (FOB30_29965)	rsmD	3330058..3330672 (-)	615	WP_053296820.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOB30_RS29970 (FOB30_29970)	pilA	3330886..3332028 (+)	1143	WP_006416170.1	signal recognition particle-docking protein FtsY	Machinery gene
FOB30_RS29975 (FOB30_29975)	maiA	3332099..3332743 (-)	645	WP_053296819.1	maleylacetoacetate isomerase	-
FOB30_RS29980 (FOB30_29980)	ybiB	3332916..3333887 (+)	972	WP_053296818.1	DNA-binding protein YbiB	-
FOB30_RS29985 (FOB30_29985)	leuA	3334279..3335925 (+)	1647	WP_053296817.1	2-isopropylmalate synthase	-
FOB30_RS29990 (FOB30_29990)	-	3336061..3336444 (-)	384	WP_006398232.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40336.19 Da
• Isoelectric Point: 4.9462

>NTDB_id=387231 FOB30_RS29970 WP_006416170.1 3330886..3332028(+) (pilA) [Burkholderia multivorans strain FDAARGOS_622]
MFSFFKRFKKTQEPGSAESQPADAPQPDAPSDAHDADVPPAPAPAEPAAPAVVMTVTPSDNGRDEVVETVEIVPPPVQDA
SAKKSWLARLKTGLAKTGSSITGVFVNTKIDDALYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKSALRD
LLVELLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLTVWGERNNVTVVQ
QESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAF
DDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAEEFADALLG

Nucleotide

• Length: 1143 bp

>NTDB_id=387231 FOB30_RS29970 WP_006416170.1 3330886..3332028(+) (pilA) [Burkholderia multivorans strain FDAARGOS_622]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGGCTCCGCGGAATCGCAGCCGGCCGACGCGCCGCAACC
CGACGCCCCGTCCGACGCGCACGACGCCGACGTTCCGCCTGCACCTGCGCCTGCCGAACCGGCCGCGCCCGCCGTCGTAA
TGACGGTCACGCCGAGCGACAACGGCCGCGACGAAGTCGTCGAGACCGTCGAAATCGTGCCGCCGCCCGTGCAGGATGCA
TCGGCGAAGAAATCATGGCTCGCGCGCCTGAAGACGGGCCTCGCGAAAACGGGCTCGAGCATCACCGGCGTATTCGTGAA
CACGAAGATCGACGACGCGCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCGGGCGTCGACGCGACCGAGT
ACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGGGTGGGCCGCCTGACCGACCCGCAGCAGGTGAAGAGCGCGCTGCGCGAC
CTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCGGCCGTGCGCAGCCGCTCGTGATGATGATCGCGGG
CGTAAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGTCGGTGCTGCTCG
CCGCGGGCGATACGTTCCGCGCCGCGGCGCGCGAACAGCTGACGGTCTGGGGCGAACGCAACAACGTGACCGTCGTGCAG
CAGGAAAGCGGCGACCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGC
CGACACGGCCGGCCGCCTGCCGACGCAGCTTCACCTCATGGAAGAGCTGAAGAAGGTGAAGCGCGTGATCGCGAAGGCAC
ACGACGGCGCGCCGCACGAAGTGCTGCTCGTGATCGATGCGAACACCGGTCAGAACGCGCTCACGCAGGTGAAGGCATTC
GACGATGCGCTCGGCCTGACGGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCTCGCCGCGATCGC
GCGGCAGCGGCCGGTGCCCGTGTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCAGCGCCGAGGAAT
TCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (98-160)

• SRP54-type protein, GTPase domain (SRP54) (181-380)

3D structure

• AlphaFold DB: A0A0H3KRG3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.846	100	0.589