Detailed information NTG0387076

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ36_RS12420
• Genome accession: NZ_CP051711
• Coordinates: 2589561..2590544 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-123
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2584561..2595544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ36_RS12390 (HHJ36_12390)	bcsG	2585197..2585625 (+)	429	Protein_2452	cellulose biosynthesis protein BcsG	-
HHJ36_RS12395 (HHJ36_12395)	-	2585711..2585818 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ36_RS12400 (HHJ36_12400)	-	2586194..2586301 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ36_RS12405 (HHJ36_12405)	-	2586676..2586783 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ36_RS12410 (HHJ36_12410)	yhjV	2587259..2588530 (+)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
HHJ36_RS12415 (HHJ36_12415)	dppF	2588560..2589564 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ36_RS12420 (HHJ36_12420)	amiE	2589561..2590544 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ36_RS12425 (HHJ36_12425)	dppC	2590555..2591457 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ36_RS12430 (HHJ36_12430)	dppB	2591467..2592486 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ36_RS12435 (HHJ36_12435)	dppA	2592637..2594244 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=387076 HHJ36_RS12420 WP_001196477.1 2589561..2590544(-) (amiE) [Escherichia coli strain SCU-123]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=387076 HHJ36_RS12420 WP_001196477.1 2589561..2590544(-) (amiE) [Escherichia coli strain SCU-123]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404