Detailed information NTG0386956

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ37_RS00850
• Genome accession: NZ_CP051706
• Coordinates: 184368..185351 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-124
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 179368..190351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ37_RS00835 (HHJ37_00835)	dppA	180512..182119 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HHJ37_RS00840 (HHJ37_00840)	dppB	182426..183445 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ37_RS00845 (HHJ37_00845)	dppC	183455..184357 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ37_RS00850 (HHJ37_00850)	amiE	184368..185351 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ37_RS00855 (HHJ37_00855)	dppF	185348..186352 (+)	1005	WP_001525880.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ37_RS00860 (HHJ37_00860)	yhjV	186382..187653 (-)	1272	WP_001525879.1	aromatic amino acid transport family protein	-
HHJ37_RS00865 (HHJ37_00865)	-	188129..188236 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ37_RS00870 (HHJ37_00870)	-	188607..188714 (+)	108	WP_000170748.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ37_RS00875 (HHJ37_00875)	-	189088..189195 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=386956 HHJ37_RS00850 WP_001196477.1 184368..185351(+) (amiE) [Escherichia coli strain SCU-124]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=386956 HHJ37_RS00850 WP_001196477.1 184368..185351(+) (amiE) [Escherichia coli strain SCU-124]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404