Detailed information NTG0386936

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: HHJ38_RS20070
• Genome accession: NZ_CP051700
• Coordinates: 4096749..4097954 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain SCU-125
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4091749..4102954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ38_RS20050 (HHJ38_20060)	-	4091806..4093062 (+)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-
HHJ38_RS20055 (HHJ38_20065)	neuC	4093059..4094234 (+)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
HHJ38_RS20060 (HHJ38_20070)	-	4094227..4095228 (+)	1002	WP_250884474.1	DUF6716 putative glycosyltransferase	-
HHJ38_RS20065 (HHJ38_20075)	-	4095370..4096599 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
HHJ38_RS20070 (HHJ38_20080)	kpsS	4096749..4097954 (-)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
HHJ38_RS20075 (HHJ38_20085)	-	4097989..4100016 (-)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
HHJ38_RS20080 (HHJ38_20090)	kdsB	4100013..4100753 (-)	741	WP_000030761.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HHJ38_RS20085 (HHJ38_20095)	-	4100763..4102439 (-)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=386936 HHJ38_RS20070 WP_001161835.1 4096749..4097954(-) (kpsS) [Escherichia coli strain SCU-125]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=386936 HHJ38_RS20070 WP_001161835.1 4096749..4097954(-) (kpsS) [Escherichia coli strain SCU-125]
ATGCAAGGTAATGCATTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGAATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387