Detailed information NTG0386920

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HHJ38_RS16930
• Genome accession: NZ_CP051700
• Coordinates: 3456033..3457016 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain SCU-125
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3451033..3462016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ38_RS16915 (HHJ38_16925)	dppA	3452177..3453784 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HHJ38_RS16920 (HHJ38_16930)	dppB	3454091..3455110 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HHJ38_RS16925 (HHJ38_16935)	dppC	3455120..3456022 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HHJ38_RS16930 (HHJ38_16940)	amiE	3456033..3457016 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HHJ38_RS16935 (HHJ38_16945)	dppF	3457013..3458017 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HHJ38_RS16940 (HHJ38_16950)	yhjV	3458047..3459318 (-)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
HHJ38_RS16945 (HHJ38_16955)	ldrD	3459794..3459901 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
HHJ38_RS16950 (HHJ38_16960)	bcsG	3459988..3461667 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
HHJ38_RS16955 (HHJ38_16965)	bcsF	3461664..3461855 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=386920 HHJ38_RS16930 WP_001196477.1 3456033..3457016(+) (amiE) [Escherichia coli strain SCU-125]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=386920 HHJ38_RS16930 WP_001196477.1 3456033..3457016(+) (amiE) [Escherichia coli strain SCU-125]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGATCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404