Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   F3P16_RS02305 Genome accession   NZ_CP043953
Coordinates   470713..471597 (+) Length   294 a.a.
NCBI ID   WP_000914774.1    Uniprot ID   N9LGJ0
Organism   Acinetobacter baumannii strain K09-14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 465713..476597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F3P16_RS02280 (F3P16_02280) - 466111..467358 (-) 1248 WP_000893466.1 YihY family inner membrane protein -
  F3P16_RS02285 (F3P16_02285) wrbA 467646..468239 (+) 594 WP_001183348.1 NAD(P)H:quinone oxidoreductase -
  F3P16_RS02290 (F3P16_02290) - 468292..468867 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  F3P16_RS02295 (F3P16_02295) - 468940..469653 (-) 714 WP_032027127.1 DUF3108 domain-containing protein -
  F3P16_RS02300 (F3P16_02300) - 469811..470482 (-) 672 WP_001193960.1 hypothetical protein -
  F3P16_RS02305 (F3P16_02305) tonB2 470713..471597 (+) 885 WP_000914774.1 energy transducer TonB Machinery gene
  F3P16_RS02310 (F3P16_02310) ybeY 471687..472163 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  F3P16_RS02315 (F3P16_02315) - 472173..473261 (-) 1089 WP_000122983.1 PhoH family protein -
  F3P16_RS02320 (F3P16_02320) miaB 473299..474750 (-) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33622.48 Da        Isoelectric Point: 9.0935

>NTDB_id=386776 F3P16_RS02305 WP_000914774.1 470713..471597(+) (tonB2) [Acinetobacter baumannii strain K09-14]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=386776 F3P16_RS02305 WP_000914774.1 470713..471597(+) (tonB2) [Acinetobacter baumannii strain K09-14]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCATCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTGATCAAGCATGCAGACTTTTTAGCCCAAGCCGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9LGJ0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

100

100

1

Multiple sequence alignment