Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NMAA_RS01000 Genome accession   NC_017512
Coordinates   190488..191456 (-) Length   322 a.a.
NCBI ID   WP_002219908.1    Uniprot ID   -
Organism   Neisseria meningitidis WUE 2594     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 185488..196456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMAA_RS00975 (NMAA_0157) - 186063..186401 (+) 339 WP_002214902.1 P-II family nitrogen regulator -
  NMAA_RS00980 (NMAA_0158) - 186467..187684 (-) 1218 WP_002246495.1 YadA-like family protein -
  NMAA_RS00985 (NMAA_0159) - 188000..188758 (-) 759 WP_002246494.1 ABC transporter ATP-binding protein -
  NMAA_RS00990 (NMAA_0160) - 188853..189479 (-) 627 WP_002246493.1 FmdE family protein -
  NMAA_RS00995 (NMAA_0161) - 189524..190498 (-) 975 WP_002246492.1 iron chelate uptake ABC transporter family permease subunit -
  NMAA_RS01000 (NMAA_0162) ceuB 190488..191456 (-) 969 WP_002219908.1 ABC transporter permease Machinery gene
  NMAA_RS01005 (NMAA_0163) - 191620..192585 (-) 966 WP_014580482.1 siderophore ABC transporter substrate-binding protein -
  NMAA_RS15740 - 192669..192731 (+) 63 Protein_190 transposase -
  NMAA_RS01010 (NMAA_0164) fetA 193640..195781 (-) 2142 WP_014580483.1 TonB-dependent siderophore receptor FetA/FrpB -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34395.65 Da        Isoelectric Point: 10.0891

>NTDB_id=38656 NMAA_RS01000 WP_002219908.1 190488..191456(-) (ceuB) [Neisseria meningitidis WUE 2594]
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAH
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=38656 NMAA_RS01000 WP_002219908.1 190488..191456(-) (ceuB) [Neisseria meningitidis WUE 2594]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACCAACCTCCTGCTGCTGGCGGTATTGTTTGCCGTCAGCCTGTCGGTGGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTATCCGACAGCCAGCAGGTCATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGCTGACGGGCGCGTCTATGGCGGTGGCGGGCATGATTATGCAGATTCTGATGCGTAACCGTTTTGTC
GAGCCTTCTATGGCGGGCGCGGGTCAAAGCGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGCTGATCGGGATGCTGGTGTTTATGCTGCTGATCCGCCGTCTGCCGC
CGACGGCGCAATTAATGGTGCCGCTGGTGGGGATTATTTTCGGCGGCGTGGTTGAGGCAGTGGCGACGTTTATCGCGTAT
GAAAACGAAATGCTGCAAATGCTCGGCGTGTGGCAGCAGGGCGATTTTTCGAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTATCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAGACGGTCA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGGCTGATTATTGTGGCTTTGATTACGTCGCTGGTCATT
GTAACGGTCGGCAATATTCCGTTTGTCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATAGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTGGCTTTGTTGGGCGCGTCTTTGGTTTTATTGTGCGACATTATCGGACGCGTGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTGTTGGGTACGGCTTTGTTTTTGTGGCTTTTGTTAAGGAAACCTGCTCAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.528

93.478

0.388

Multiple sequence alignment