Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AT571_RS15135 | Genome accession | NZ_CP043910 |
| Coordinates | 3188418..3188798 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836915.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AB043 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3183418..3193798
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT571_RS15105 (AT571_15105) | kdsB | 3184321..3185082 (+) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AT571_RS15110 (AT571_15110) | - | 3185094..3186074 (+) | 981 | WP_001075412.1 | DNA polymerase III subunit delta' | - |
| AT571_RS15115 (AT571_15115) | - | 3186086..3186427 (+) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| AT571_RS15120 (AT571_15120) | - | 3186445..3187218 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AT571_RS15125 (AT571_15125) | - | 3187256..3187864 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AT571_RS15130 (AT571_15130) | - | 3187874..3188428 (+) | 555 | WP_000841375.1 | type II secretion system protein | - |
| AT571_RS15135 (AT571_15135) | xcpV | 3188418..3188798 (+) | 381 | WP_000836915.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AT571_RS15140 (AT571_15140) | xcpW | 3188798..3189499 (+) | 702 | WP_000594584.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AT571_RS15145 (AT571_15145) | gspK | 3189499..3190458 (+) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| AT571_RS15150 (AT571_15150) | - | 3190688..3191284 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| AT571_RS15155 (AT571_15155) | ung | 3191335..3192048 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AT571_RS15160 (AT571_15160) | - | 3192045..3193169 (+) | 1125 | WP_000982062.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AT571_RS15165 (AT571_15165) | tadA | 3193176..3193679 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=386536 AT571_RS15135 WP_000836915.1 3188418..3188798(+) (xcpV) [Acinetobacter baumannii strain AB043]
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=386536 AT571_RS15135 WP_000836915.1 3188418..3188798(+) (xcpV) [Acinetobacter baumannii strain AB043]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
98.413 |
100 |
0.984 |