Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   F2A31_RS13805 Genome accession   NZ_CP043909
Coordinates   2959075..2961300 (+) Length   741 a.a.
NCBI ID   WP_150026988.1    Uniprot ID   A0A5P1UVF6
Organism   Acinetobacter suaedae strain C16S1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2954075..2966300
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F2A31_RS13785 (F2A31_13785) lnt 2954842..2956401 (+) 1560 WP_150026980.1 apolipoprotein N-acyltransferase -
  F2A31_RS13790 (F2A31_13790) - 2956523..2956867 (-) 345 WP_150026982.1 hypothetical protein -
  F2A31_RS13795 (F2A31_13795) gspG 2957131..2957721 (-) 591 WP_150026984.1 type II secretion system major pseudopilin GspG -
  F2A31_RS13800 (F2A31_13800) gspF 2957721..2958926 (-) 1206 WP_150026986.1 type II secretion system inner membrane protein GspF -
  F2A31_RS13805 (F2A31_13805) priA 2959075..2961300 (+) 2226 WP_150026988.1 primosomal protein N' Machinery gene
  F2A31_RS13810 (F2A31_13810) - 2961341..2963158 (+) 1818 WP_150026990.1 cation:proton antiporter -
  F2A31_RS13815 (F2A31_13815) hslO 2963267..2964142 (+) 876 WP_075316287.1 Hsp33 family molecular chaperone HslO -
  F2A31_RS13820 (F2A31_13820) - 2964277..2965239 (+) 963 WP_150026991.1 DnaJ C-terminal domain-containing protein -
  F2A31_RS13825 (F2A31_13825) - 2965251..2965577 (+) 327 WP_004637727.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84156.11 Da        Isoelectric Point: 8.6568

>NTDB_id=386483 F2A31_RS13805 WP_150026988.1 2959075..2961300(+) (priA) [Acinetobacter suaedae strain C16S1]
MPSENSNAILYRIRVAIPVYVYDTFDYTVSAEQYQQAQIGARVAVSFGRQNLVGIIVEKIDPNQVFTGQFKLKAITELLD
KEAILDQHVLTLMTWSAQYYQFPIGEVMQSALPTLLRQGRALDILFHLWKIVPNDDPNALLKRSQKQYDAYQILKIHPHG
TTENVLNLSGVETATLKALEKKGLVECCLEPHDFSPSPVQLAQVPLTANEDQKTAIQQILKAQHHYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTVARFKSRFHCDIALLHSGLNDSKRLQAWQHAQTGKASIVIGTRSAIYTPL
PHLGLIILDEEHDLSYKQQEGFRYHTRDVALYRGYLQHCPVILGSATPSIDSYHLVESGKLHLLELNQRAGAAVLPKMHV
IDLKIAKKKHGISQNLIEQIKLTLERKEQVLIFLNRRGYAPILMCESCGWQANCPHCDAHFTLHSQPYHYLHCHHCGTIN
RLPDHCPACQKQSLKTIGAGTAKLEEHLQELFPHNEVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFPH
VTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGNVYLQSLRPDHPMLTTLIEHDYRTVAKQMLAERKLAML
PPYRYTVLVRVESKDREYSQNFLADIAQQLRTMAGDLVDIWGPIPAPMERKAGRYRAHMVILSADRAKLHFYLRQWWQQV
VHLPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=386483 F2A31_RS13805 WP_150026988.1 2959075..2961300(+) (priA) [Acinetobacter suaedae strain C16S1]
ATGCCTAGCGAAAATTCTAACGCCATTTTGTACCGTATTCGAGTTGCCATACCTGTATATGTGTATGACACGTTTGACTA
TACGGTCAGTGCCGAACAGTATCAACAAGCACAGATTGGAGCGCGTGTTGCAGTGTCGTTCGGACGACAAAATCTCGTAG
GCATCATTGTTGAAAAAATTGATCCCAATCAAGTTTTCACAGGTCAATTTAAACTGAAAGCAATTACTGAATTACTTGAT
AAAGAAGCAATATTAGATCAACACGTTTTAACTTTGATGACATGGTCTGCCCAGTACTATCAATTCCCAATTGGCGAAGT
GATGCAAAGTGCCCTCCCCACACTACTCAGGCAAGGACGTGCATTAGACATTTTATTTCATCTGTGGAAAATCGTGCCAA
ATGATGATCCGAATGCATTATTGAAGCGCTCTCAAAAACAATATGATGCGTATCAAATCTTAAAAATACATCCTCATGGC
ACAACTGAAAATGTCTTGAACCTCAGTGGTGTTGAAACTGCAACACTCAAAGCTTTAGAAAAGAAAGGGTTGGTTGAATG
TTGTCTTGAACCGCATGATTTTAGCCCCTCGCCTGTACAATTGGCGCAGGTACCACTCACAGCCAACGAGGATCAAAAAA
CAGCGATTCAACAAATTCTCAAGGCACAACATCATTACCAAGCATTTTTACTAGATGGCTTAACAGGCAGTGGCAAAACT
GAAGTTTATCTGCAAGTCATGCATGAAGTATTAAAGCAGGGTAAGCAGGTGTTGGTACTGGTTCCGGAAATCGGTCTTAC
CCCTCAAACTGTCGCTCGCTTTAAATCACGGTTTCATTGTGATATTGCTTTATTACATTCAGGTTTAAATGACTCGAAGC
GCTTACAAGCATGGCAACACGCACAAACAGGAAAAGCTTCGATTGTGATCGGGACTCGTTCTGCGATCTACACGCCGCTT
CCTCATCTCGGACTGATTATCCTCGATGAAGAACATGATCTTTCTTATAAACAGCAAGAAGGCTTTCGTTATCATACCCG
TGATGTAGCACTCTACAGAGGATACTTACAACATTGTCCTGTGATTCTTGGATCTGCAACACCGAGTATCGATAGCTATC
ATCTGGTCGAGTCAGGCAAACTACATCTACTGGAACTCAATCAACGTGCAGGCGCTGCTGTACTGCCAAAAATGCATGTG
ATTGATTTAAAAATTGCCAAGAAAAAGCATGGCATCAGCCAAAATTTAATTGAGCAGATCAAACTCACCTTAGAGCGCAA
AGAACAGGTGTTGATCTTTCTCAACCGTCGAGGTTATGCACCGATTCTGATGTGTGAAAGTTGCGGTTGGCAAGCCAATT
GCCCCCATTGTGATGCACATTTCACCCTTCATTCTCAGCCTTATCACTATTTACATTGTCATCATTGCGGCACCATCAAT
CGCCTCCCCGATCATTGTCCGGCATGCCAAAAACAAAGTTTAAAAACGATTGGTGCTGGAACGGCAAAGCTTGAAGAGCA
TTTACAAGAGTTATTTCCTCACAATGAAGTGATTCGAGTTGATCGTGACAGTACCAGCCGTGTCGGAAGTTGGCAGAAAA
TTTATGACCGTATCCAACAAAATAAACCGAGTATTTTATTGGGCACACAAATGCTTGCTAAAGGACATCATTTCCCACAT
GTAACTTTGGTGGCTATTTTAGATATTGACGCTGGTTTACTGAGCGTGGATATCCGCGCCCCTGAACGTACCGCACAATT
AATAGTACAAGTGGCCGGACGCGCTGGACGAGGCGAACATAAAGGGAATGTCTATTTACAAAGTCTTCGCCCTGATCATC
CTATGCTCACCACATTAATTGAACATGACTATCGTACGGTTGCTAAACAAATGCTGGCTGAGCGTAAACTTGCAATGCTC
CCTCCATATCGTTATACAGTATTGGTACGTGTTGAATCGAAAGATCGAGAATATAGCCAGAACTTTTTGGCGGATATTGC
GCAACAACTGAGAACAATGGCTGGCGATTTAGTTGATATTTGGGGGCCAATTCCCGCACCGATGGAACGTAAAGCTGGAC
GTTATCGTGCCCACATGGTGATTTTGTCGGCCGATCGCGCCAAACTGCATTTTTATTTGCGCCAATGGTGGCAACAAGTG
GTACATTTACCTCGTCAGCACCAACTCAGGCTATCCATCGATGTTGATCCACAAGAGTTTAGTTAG

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(14-113)

DEAD/DEAH box helicase (DEAD)

(210-371)

Primosomal protein N C-terminal domain (PriA_C)

(642-737)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P1UVF6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

82.585

99.19

0.819

Multiple sequence alignment