Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   F2A31_RS09160 Genome accession   NZ_CP043909
Coordinates   1954527..1955480 (-) Length   317 a.a.
NCBI ID   WP_150026130.1    Uniprot ID   A0A5P1UT20
Organism   Acinetobacter suaedae strain C16S1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1949527..1960480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F2A31_RS09135 (F2A31_09135) - 1949575..1950366 (-) 792 WP_215899250.1 DUF4198 domain-containing protein -
  F2A31_RS09140 (F2A31_09140) - 1950597..1951817 (+) 1221 WP_150026127.1 MFS transporter -
  F2A31_RS09145 (F2A31_09145) - 1951863..1952813 (-) 951 WP_150026128.1 siderophore ABC transporter substrate-binding protein -
  F2A31_RS09150 (F2A31_09150) - 1952823..1953587 (-) 765 WP_150026129.1 ABC transporter ATP-binding protein -
  F2A31_RS09155 (F2A31_09155) - 1953578..1954534 (-) 957 WP_005081105.1 iron chelate uptake ABC transporter family permease subunit -
  F2A31_RS09160 (F2A31_09160) ceuB 1954527..1955480 (-) 954 WP_150026130.1 ABC transporter permease Machinery gene
  F2A31_RS09165 (F2A31_09165) - 1955788..1956405 (-) 618 WP_150026131.1 LysE family translocator -
  F2A31_RS09170 (F2A31_09170) - 1956496..1957470 (-) 975 WP_150026132.1 ion transporter -
  F2A31_RS09175 (F2A31_09175) - 1957740..1959193 (+) 1454 Protein_1789 DASS family sodium-coupled anion symporter -
  F2A31_RS09180 (F2A31_09180) - 1959345..1959926 (-) 582 WP_150026133.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34505.61 Da        Isoelectric Point: 9.6461

>NTDB_id=386478 F2A31_RS09160 WP_150026130.1 1954527..1955480(-) (ceuB) [Acinetobacter suaedae strain C16S1]
MIKRRYLLVLLISLALISLFVGVGDVSLTGLIAGNPQDWQLFWTSRLPRLMAIVVAGAGLSVCGLIMQSLSRNRFVSPTT
AGLYDCARLGILISIILLPSASIFAKTGFAIIVTLIGAMTFMSILATLKHRDTVFVPLVGMIFGSIISAFTTFIALQLDL
LQNLAGWLQGDFSTILNGQYELIYLSMPVLALIYIFANRFVLAGLGEDFATNLGLNYKQTLFLGLLLVSVITGVVIVTVG
AIPFLGLIVPNLVSLYLGDHIRKTLSHTALLGALLVLLCDVFGRVVIYPYEVSVSLIMGVVGSLIFLWLLLRRYRYA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=386478 F2A31_RS09160 WP_150026130.1 1954527..1955480(-) (ceuB) [Acinetobacter suaedae strain C16S1]
ATGATTAAACGGCGCTATTTACTTGTTTTACTCATTTCTTTGGCATTGATTTCCTTATTTGTTGGTGTTGGGGATGTGAG
CCTTACAGGATTGATTGCAGGAAATCCACAAGACTGGCAGCTCTTTTGGACGAGTCGATTACCACGTCTGATGGCGATTG
TTGTTGCAGGTGCAGGCCTAAGTGTCTGTGGCTTGATTATGCAGTCATTAAGTCGAAATCGTTTTGTTTCACCAACCACA
GCGGGTTTATATGACTGTGCACGGCTGGGCATTTTAATTTCGATTATTTTGCTTCCAAGTGCTTCTATTTTTGCCAAAAC
TGGATTTGCGATTATTGTCACGCTGATTGGTGCGATGACATTTATGAGTATTCTTGCCACTTTAAAGCACCGAGATACGG
TATTTGTGCCACTCGTTGGGATGATTTTTGGCAGCATTATTTCTGCATTTACGACTTTTATTGCTTTGCAACTTGATTTG
TTGCAGAACTTAGCAGGGTGGTTGCAAGGCGATTTCTCAACCATTTTGAATGGTCAATATGAATTGATTTATTTAAGTAT
GCCCGTTCTCGCCTTGATTTATATATTTGCCAATCGTTTTGTCTTGGCCGGCTTGGGTGAAGACTTTGCGACAAATCTAG
GTTTGAACTATAAACAGACACTTTTCTTAGGTTTGCTGCTGGTATCAGTGATTACTGGGGTGGTGATTGTGACTGTCGGC
GCAATTCCTTTTCTCGGTTTAATTGTGCCAAATCTAGTCAGCCTTTATTTAGGCGATCATATTCGCAAGACGCTTTCACA
TACGGCATTGCTTGGTGCGTTGCTGGTCTTACTGTGTGATGTTTTTGGTCGAGTGGTGATTTATCCCTATGAGGTTTCGG
TCAGCCTGATTATGGGTGTAGTCGGTAGTTTGATCTTCCTGTGGTTATTACTCAGGAGGTATCGATATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P1UT20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.16

98.738

0.495

Multiple sequence alignment