Detailed information NTG0386423

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HH202_RS20960
• Genome accession: NZ_CP051659
• Coordinates: 4243075..4244058 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain 1162C
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4238075..4249058

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HH202_RS20935 (HH202_20715)	-	4239224..4239331 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HH202_RS20940 (HH202_20720)	-	4239707..4239814 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
HH202_RS20945 (HH202_20725)	-	4240190..4240297 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HH202_RS20950 (HH202_20730)	yhjV	4240773..4242044 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
HH202_RS20955 (HH202_20735)	dppF	4242074..4243078 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HH202_RS20960 (HH202_20740)	amiE	4243075..4244058 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HH202_RS20965 (HH202_20745)	dppC	4244069..4244971 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HH202_RS20970 (HH202_20750)	dppB	4244981..4246000 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HH202_RS20975 (HH202_20755)	dppA	4246307..4247914 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=386423 HH202_RS20960 WP_001196477.1 4243075..4244058(-) (amiE) [Escherichia coli strain 1162C]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=386423 HH202_RS20960 WP_001196477.1 4243075..4244058(-) (amiE) [Escherichia coli strain 1162C]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404