Detailed information NTG0386239

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: HHJ58_RS09025
• Genome accession: NZ_CP051640
• Coordinates: 1892188..1894032 (+)
• Length: 614 a.a.
• NCBI ID: WP_035689220.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain ADL-AP07
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1887188..1899032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ58_RS09005 (HHJ58_09005)	-	1888450..1889672 (+)	1223	WP_124994771.1	IS3 family transposase	-
HHJ58_RS09010 (HHJ58_09010)	-	1889721..1890134 (-)	414	WP_035689214.1	hypothetical protein	-
HHJ58_RS09015 (HHJ58_09015)	lysA	1890289..1891539 (-)	1251	WP_035689216.1	diaminopimelate decarboxylase	-
HHJ58_RS11825	-	1891550..1891669 (-)	120	WP_035689218.1	lipoprotein	-
HHJ58_RS09020 (HHJ58_09020)	cyaY	1891817..1892125 (+)	309	WP_017806692.1	iron donor protein CyaY	-
HHJ58_RS09025 (HHJ58_09025)	recQ	1892188..1894032 (+)	1845	WP_035689220.1	DNA helicase RecQ	Machinery gene
HHJ58_RS09030 (HHJ58_09030)	-	1894124..1895302 (+)	1179	WP_035689222.1	acetyl-CoA carboxylase biotin carboxylase subunit family protein	-
HHJ58_RS09035 (HHJ58_09035)	-	1895311..1896066 (+)	756	WP_035689223.1	esterase family protein	-
HHJ58_RS09040 (HHJ58_09040)	-	1896118..1896942 (-)	825	WP_035689225.1	alpha/beta hydrolase	-
HHJ58_RS09045 (HHJ58_09045)	gpt	1896994..1897458 (-)	465	WP_035689227.1	xanthine phosphoribosyltransferase	-

Sequence

Protein

• Length: 614 a.a.
• Molecular weight: 69783.07 Da
• Isoelectric Point: 8.5034

>NTDB_id=386239 HHJ58_RS09025 WP_035689220.1 1892188..1894032(+) (recQ) [Avibacterium paragallinarum strain ADL-AP07]
MEKNTALKVLNEVFGYQSFRNGQEEVINAALSHQDSLVIMATGNGKSLCYQIPALCFPGLTLVISPLISLMKDQVDQLLA
NGIEVDYLNSTQTFEQQQIVQNKAISGQLKLLYISPEKAMTTSFFQFISHCQVSFIAIDEAHCISQWGHDFRPEYTQLGG
LKRCFPNAPIMALTATADSATRQDILHHLQLDNPHIYIGSFDRPNIRYTLVEKFKPMEQLCQFVLGQKGKSGIVYCNSRN
KVERLAESLRKKGVAAQAYHAGMEASQREQVQRAFQRDNVQVVVATVAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRA
GRDDLPAEAVLFYEPADYAWLQKMLLEKPESPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQAPCKNCDICLDPP
KKYDGLIDAQKVMSTIYRVGQMFGVHYVIGVLRGMQNQKIKDNQHDQLSVYGIGKDKSKEYWQSVIRQLIHLGLVQQVMN
QFHSVLQLTENARPILRGEQPLELAMPRVSSIMTAQSAQKSAVQNYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQE
MAQYQPTNKREMLQINGVGATKLERFGQAFLHIIQEHKSLSTKNSQPLKLSNEK

Nucleotide

• Length: 1845 bp

>NTDB_id=386239 HHJ58_RS09025 WP_035689220.1 1892188..1894032(+) (recQ) [Avibacterium paragallinarum strain ADL-AP07]
ATGGAAAAAAACACCGCACTTAAGGTTCTGAACGAGGTTTTTGGTTACCAATCTTTCCGCAATGGACAAGAAGAAGTGAT
CAACGCCGCCCTTTCACACCAAGATAGCCTTGTGATTATGGCAACGGGAAACGGAAAATCCCTTTGCTATCAAATTCCTG
CGCTTTGCTTTCCGGGGCTAACCTTAGTCATTTCACCGCTGATTTCCTTAATGAAAGATCAAGTGGATCAACTGCTTGCT
AACGGTATTGAAGTGGATTATCTCAATTCCACACAAACCTTTGAGCAGCAGCAAATTGTACAAAATAAGGCGATTTCAGG
GCAGCTCAAATTGCTTTATATTTCGCCCGAAAAGGCGATGACAACCAGTTTTTTCCAATTTATTTCTCATTGCCAAGTGA
GTTTTATTGCCATTGATGAAGCTCATTGTATTTCCCAATGGGGACACGATTTCCGCCCTGAATACACCCAACTTGGCGGC
TTAAAACGTTGCTTTCCAAATGCGCCGATAATGGCGCTCACAGCCACCGCAGACAGTGCCACAAGGCAAGATATTTTGCA
CCATTTGCAACTGGATAATCCGCATATTTATATCGGCAGCTTTGATCGCCCAAATATTCGCTACACTTTGGTGGAAAAAT
TTAAGCCAATGGAGCAGCTATGCCAATTTGTGCTAGGGCAGAAAGGCAAAAGTGGTATCGTTTATTGCAACAGCCGTAAC
AAAGTGGAACGCTTGGCGGAAAGCTTGCGCAAAAAAGGCGTGGCAGCACAAGCCTATCACGCAGGAATGGAGGCCAGCCA
GCGCGAGCAAGTTCAGCGTGCCTTTCAGCGTGATAATGTGCAAGTGGTGGTGGCAACCGTTGCTTTTGGAATGGGCATTA
ACAAATCCAACGTGCGATTTGTCGCCCATTTTGATTTGCCACGCAGTATTGAGGCGTATTACCAAGAAACAGGGCGCGCA
GGGCGTGATGATTTGCCTGCTGAAGCGGTGCTGTTTTACGAACCCGCCGATTATGCGTGGTTACAAAAAATGCTGCTGGA
AAAACCAGAAAGCCCGCAGCGCCAAATTGAACAGCATAAATTAGAAGCCATCGGCGAATTTGCCGAAAGTCAAACTTGCC
GCCGTTTAGTTTTGCTGAATTATTTTGGCGAACATCGCCAAGCGCCGTGCAAAAACTGCGATATTTGCCTTGATCCGCCG
AAAAAATATGACGGCTTAATTGATGCGCAAAAAGTGATGTCCACCATTTATCGTGTAGGGCAAATGTTTGGCGTGCATTA
TGTGATCGGCGTGCTGCGCGGAATGCAAAATCAAAAAATTAAAGATAACCAGCACGATCAGCTCAGCGTGTACGGCATTG
GCAAAGACAAAAGCAAAGAATATTGGCAATCGGTGATCCGCCAGCTGATTCATCTTGGGTTGGTGCAACAAGTGATGAAT
CAATTTCATTCGGTGTTACAACTGACGGAAAATGCGCGCCCAATTTTGCGTGGCGAACAGCCTTTAGAGCTGGCAATGCC
AAGGGTTTCTTCCATTATGACCGCACAAAGCGCACAAAAAAGTGCGGTGCAAAATTATGACAAAGATCTCTTTGCTCGCC
TGCGTTTCTTACGCAAACAAATTGCCGACAAAGAAAATATCCCCCCTTATATTGTGTTCAACGATGCCACTTTGCAAGAA
ATGGCACAATATCAACCCACCAACAAGCGCGAAATGCTACAAATCAACGGCGTGGGCGCAACCAAATTAGAGCGCTTTGG
ACAGGCATTCCTGCATATTATCCAAGAGCATAAATCACTCAGCACAAAAAACAGCCAACCGCTTAAATTGTCTAACGAAA
AATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (218-322)

• DEAD/DEAH box helicase (DEAD) (22-179)

• HRDC domain (HRDC) (528-594)

• RecQ zinc-binding (RecQ_Zn_bind) (336-397)

• RQC domain (RQC) (399-509)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	39.566	97.557	0.386