Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   F1613_RS01600 Genome accession   NZ_CP043845
Coordinates   334075..334971 (-) Length   298 a.a.
NCBI ID   WP_002456718.1    Uniprot ID   A0A2T4LGX3
Organism   Staphylococcus epidermidis strain ATCC 12228     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 329075..339971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F1613_RS01580 (F1613_01565) - 330155..330340 (-) 186 Protein_301 solute:sodium symporter family transporter -
  F1613_RS01585 (F1613_01570) - 330507..331097 (-) 591 WP_002485462.1 DUF4064 domain-containing protein -
  F1613_RS01590 (F1613_01575) - 331201..333213 (-) 2013 WP_002470142.1 ABC transporter permease -
  F1613_RS01595 (F1613_01580) - 333215..333964 (-) 750 WP_001830627.1 ABC transporter ATP-binding protein -
  F1613_RS01600 (F1613_01585) braS 334075..334971 (-) 897 WP_002456718.1 sensor histidine kinase Regulator
  F1613_RS01605 (F1613_01590) braR 334977..335642 (-) 666 WP_001830679.1 response regulator transcription factor Regulator
  F1613_RS01610 (F1613_01595) - 335673..335852 (-) 180 WP_002456719.1 hypothetical protein -
  F1613_RS01615 (F1613_01600) - 336149..337618 (+) 1470 WP_002456720.1 alkaline phosphatase -
  F1613_RS01620 (F1613_01605) - 337741..339285 (-) 1545 WP_002485467.1 NAD(P)H-binding protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34883.51 Da        Isoelectric Point: 6.8361

>NTDB_id=386189 F1613_RS01600 WP_002456718.1 334075..334971(-) (braS) [Staphylococcus epidermidis strain ATCC 12228]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=386189 F1613_RS01600 WP_002456718.1 334075..334971(-) (braS) [Staphylococcus epidermidis strain ATCC 12228]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAATGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTCGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTCTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2T4LGX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597

Multiple sequence alignment