Detailed information NTG0386127

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: HHJ60_RS09055
• Genome accession: NZ_CP051638
• Coordinates: 1892102..1893946 (+)
• Length: 614 a.a.
• NCBI ID: WP_035689220.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain ADL-AP15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1887102..1898946

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ60_RS09035 (HHJ60_09035)	-	1888364..1889586 (+)	1223	WP_124994771.1	IS3 family transposase	-
HHJ60_RS09040 (HHJ60_09040)	-	1889635..1890048 (-)	414	WP_035689214.1	hypothetical protein	-
HHJ60_RS09045 (HHJ60_09045)	lysA	1890203..1891453 (-)	1251	WP_035689216.1	diaminopimelate decarboxylase	-
HHJ60_RS11875	-	1891464..1891583 (-)	120	WP_035689218.1	lipoprotein	-
HHJ60_RS09050 (HHJ60_09050)	cyaY	1891731..1892039 (+)	309	WP_017806692.1	iron donor protein CyaY	-
HHJ60_RS09055 (HHJ60_09055)	recQ	1892102..1893946 (+)	1845	WP_035689220.1	DNA helicase RecQ	Machinery gene
HHJ60_RS09060 (HHJ60_09060)	-	1894038..1895216 (+)	1179	WP_035689222.1	acetyl-CoA carboxylase biotin carboxylase subunit family protein	-
HHJ60_RS09065 (HHJ60_09065)	-	1895225..1895980 (+)	756	WP_035689223.1	esterase family protein	-
HHJ60_RS09070 (HHJ60_09070)	-	1896032..1896856 (-)	825	WP_035689225.1	alpha/beta hydrolase	-
HHJ60_RS09075 (HHJ60_09075)	gpt	1896908..1897372 (-)	465	WP_035689227.1	xanthine phosphoribosyltransferase	-

Sequence

Protein

• Length: 614 a.a.
• Molecular weight: 69783.07 Da
• Isoelectric Point: 8.5034

>NTDB_id=386127 HHJ60_RS09055 WP_035689220.1 1892102..1893946(+) (recQ) [Avibacterium paragallinarum strain ADL-AP15]
MEKNTALKVLNEVFGYQSFRNGQEEVINAALSHQDSLVIMATGNGKSLCYQIPALCFPGLTLVISPLISLMKDQVDQLLA
NGIEVDYLNSTQTFEQQQIVQNKAISGQLKLLYISPEKAMTTSFFQFISHCQVSFIAIDEAHCISQWGHDFRPEYTQLGG
LKRCFPNAPIMALTATADSATRQDILHHLQLDNPHIYIGSFDRPNIRYTLVEKFKPMEQLCQFVLGQKGKSGIVYCNSRN
KVERLAESLRKKGVAAQAYHAGMEASQREQVQRAFQRDNVQVVVATVAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRA
GRDDLPAEAVLFYEPADYAWLQKMLLEKPESPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQAPCKNCDICLDPP
KKYDGLIDAQKVMSTIYRVGQMFGVHYVIGVLRGMQNQKIKDNQHDQLSVYGIGKDKSKEYWQSVIRQLIHLGLVQQVMN
QFHSVLQLTENARPILRGEQPLELAMPRVSSIMTAQSAQKSAVQNYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQE
MAQYQPTNKREMLQINGVGATKLERFGQAFLHIIQEHKSLSTKNSQPLKLSNEK

Nucleotide

• Length: 1845 bp

>NTDB_id=386127 HHJ60_RS09055 WP_035689220.1 1892102..1893946(+) (recQ) [Avibacterium paragallinarum strain ADL-AP15]
ATGGAAAAAAACACCGCACTTAAGGTTCTGAACGAGGTTTTTGGTTACCAATCTTTCCGCAATGGACAAGAAGAAGTGAT
CAACGCCGCCCTTTCACACCAAGATAGCCTTGTGATTATGGCAACGGGAAACGGAAAATCCCTTTGCTATCAAATTCCTG
CGCTTTGCTTTCCGGGGCTAACCTTAGTCATTTCACCGCTGATTTCCTTAATGAAAGATCAAGTGGATCAACTGCTTGCT
AACGGTATTGAAGTGGATTATCTCAATTCCACACAAACCTTTGAGCAGCAGCAAATTGTACAAAATAAGGCGATTTCAGG
GCAGCTCAAATTGCTTTATATTTCGCCCGAAAAGGCGATGACAACCAGTTTTTTCCAATTTATTTCTCATTGCCAAGTGA
GTTTTATTGCCATTGATGAAGCTCATTGTATTTCCCAATGGGGACACGATTTCCGCCCTGAATACACCCAACTTGGCGGC
TTAAAACGTTGCTTTCCAAATGCGCCGATAATGGCGCTCACAGCCACCGCAGACAGTGCCACAAGGCAAGATATTTTGCA
CCATTTGCAACTGGATAATCCGCATATTTATATCGGCAGCTTTGATCGCCCAAATATTCGCTACACTTTGGTGGAAAAAT
TTAAGCCAATGGAGCAGCTATGCCAATTTGTGCTAGGGCAGAAAGGCAAAAGTGGTATCGTTTATTGCAACAGCCGTAAC
AAAGTGGAACGCTTGGCGGAAAGCTTGCGCAAAAAAGGCGTGGCAGCACAAGCCTATCACGCAGGAATGGAGGCCAGCCA
GCGCGAGCAAGTTCAGCGTGCCTTTCAGCGTGATAATGTGCAAGTGGTGGTGGCAACCGTTGCTTTTGGAATGGGCATTA
ACAAATCCAACGTGCGATTTGTCGCCCATTTTGATTTGCCACGCAGTATTGAGGCGTATTACCAAGAAACAGGGCGCGCA
GGGCGTGATGATTTGCCTGCTGAAGCGGTGCTGTTTTACGAACCCGCCGATTATGCGTGGTTACAAAAAATGCTGCTGGA
AAAACCAGAAAGCCCGCAGCGCCAAATTGAACAGCATAAATTAGAAGCCATCGGCGAATTTGCCGAAAGTCAAACTTGCC
GCCGTTTAGTTTTGCTGAATTATTTTGGCGAACATCGCCAAGCGCCGTGCAAAAACTGCGATATTTGCCTTGATCCGCCG
AAAAAATATGACGGCTTAATTGATGCGCAAAAAGTGATGTCCACCATTTATCGTGTAGGGCAAATGTTTGGCGTGCATTA
TGTGATCGGCGTGCTGCGCGGAATGCAAAATCAAAAAATTAAAGATAACCAGCACGATCAGCTCAGCGTGTACGGCATTG
GCAAAGACAAAAGCAAAGAATATTGGCAATCGGTGATCCGCCAGCTGATTCATCTTGGGTTGGTGCAACAAGTGATGAAT
CAATTTCATTCGGTGTTACAACTGACGGAAAATGCGCGCCCAATTTTGCGTGGCGAACAGCCTTTAGAGCTGGCAATGCC
AAGGGTTTCTTCCATTATGACCGCACAAAGCGCACAAAAAAGTGCGGTGCAAAATTATGACAAAGATCTCTTTGCTCGCC
TGCGTTTCTTACGCAAACAAATTGCCGACAAAGAAAATATCCCCCCTTATATTGTGTTCAACGATGCCACTTTGCAAGAA
ATGGCACAATATCAACCCACCAACAAGCGCGAAATGCTACAAATCAACGGCGTGGGCGCAACCAAATTAGAGCGCTTTGG
ACAGGCATTCCTGCATATTATCCAAGAGCATAAATCACTCAGCACAAAAAACAGCCAACCGCTTAAATTGTCTAACGAAA
AATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (218-322)

• DEAD/DEAH box helicase (DEAD) (22-179)

• HRDC domain (HRDC) (528-594)

• RecQ zinc-binding (RecQ_Zn_bind) (336-397)

• RQC domain (RQC) (399-509)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	39.566	97.557	0.386