Detailed information NTG0386091

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: F0362_RS25560
• Genome accession: NZ_CP043830
• Coordinates: 4883818..4885167 (-)
• Length: 449 a.a.
• NCBI ID: WP_149890023.1
• Uniprot ID: -
• Organism: Bacillus sp. BS98
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4878818..4890167

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0362_RS25540 (F0362_25540)	secA	4879147..4881654 (-)	2508	WP_000579396.1	preprotein translocase subunit SecA	-
F0362_RS25545 (F0362_25545)	raiA	4881929..4882471 (-)	543	WP_000671188.1	ribosome-associated translation inhibitor RaiA	-
F0362_RS25550 (F0362_25550)	cspC	4882790..4882987 (-)	198	WP_002045823.1	cold shock protein CspC	-
F0362_RS25555 (F0362_25555)	-	4883114..4883818 (-)	705	WP_000543523.1	ComF family protein	-
F0362_RS25560 (F0362_25560)	comFA	4883818..4885167 (-)	1350	WP_149890023.1	ATP-dependent helicase ComFA	Machinery gene
F0362_RS25565 (F0362_25565)	-	4885294..4886689 (-)	1396	Protein_4893	NlpC/P60 family protein	-
F0362_RS25570 (F0362_25570)	-	4886850..4887164 (-)	315	WP_000400852.1	helix-turn-helix domain-containing protein	-
F0362_RS25575 (F0362_25575)	-	4887336..4888178 (-)	843	WP_053446248.1	DegV family protein	-
F0362_RS25580 (F0362_25580)	-	4888417..4889052 (+)	636	WP_053446249.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50960.80 Da
• Isoelectric Point: 9.7829

>NTDB_id=386091 F0362_RS25560 WP_149890023.1 4883818..4885167(-) (comFA) [Bacillus sp. BS98]
MLSGKQLLLEELSTDVRDNLDDLKKKGEVVCVQGVKNKASTYMCQRCGNIAQRLFSSFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAEKEGEMDVNPLQWKGNLSTGQKLAAQGVMEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLKEVFPNINVAALYGGSLDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVKQAM
KEKAACIYLTATPDEEWKRNLRKGKRKGIVVSGRYHRHPLPVPKFCWCGNWKKSLINKRIPQVLLQWLKVYLNKKHPIFL
FVPHVRYIEKMSRLLKLLDDRVAGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGTEEEIFSESALV
QIAGRVGRSFEEPYGEVIYFHYGKTEAMVRAKKHIRSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=386091 F0362_RS25560 WP_149890023.1 4883818..4885167(-) (comFA) [Bacillus sp. BS98]
ATGTTATCTGGGAAACAGTTATTATTAGAAGAACTCTCTACAGACGTACGGGATAATTTAGATGATTTGAAGAAGAAGGG
AGAGGTCGTATGTGTACAAGGTGTAAAAAATAAGGCTTCTACATATATGTGTCAGCGTTGCGGAAATATAGCACAAAGAC
TCTTTTCGTCATTTTTGTGTAAAAGGTGTAGTAAAGTCTGCACATATTGCCGGAAGTGCATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTGCCGAAAAAGAGGGAGAAATGGATGTAAATCCGCTACAGTGGAAAGGAAATTT
ATCTACTGGCCAGAAGTTGGCTGCGCAAGGTGTTATGGAGGCTGTTAAACAGAAAGAATCGTTTTTTATTTGGGCTGTGT
GCGGCGCTGGAAAAACAGAAATGTTGTTTTATGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTACTTGAATTAGCACCGAGATTGAAAGAAGTATTTCCGAATATAAATGTAGCTGCTTTATACGG
TGGGAGTTTAGATCGGGAAAAAGATGCAGCGTTAGTCGTTGCGACCACCCATCAGCTATTGCGTTATTATAGAGCGTTTC
ATGTCATGATTGTAGATGAAATAGATGCCTTTCCATACCATGCAGATCAAATGTTGCAGTATGCGGTAAAACAAGCGATG
AAAGAGAAGGCGGCATGTATTTATTTAACTGCAACTCCAGATGAAGAGTGGAAGCGTAACCTTAGAAAGGGGAAACGAAA
AGGTATCGTTGTTTCTGGACGGTATCACCGTCATCCGTTGCCAGTCCCCAAATTTTGCTGGTGCGGAAACTGGAAGAAAA
GCCTCATCAATAAAAGAATTCCTCAAGTTTTACTACAATGGTTAAAAGTATACTTAAATAAAAAGCACCCCATTTTTTTA
TTTGTTCCCCATGTGCGATATATAGAAAAAATGAGTCGGTTATTGAAGCTGTTAGACGATAGAGTTGCCGGTGTGCATGC
AGAAGATCCAATGAGAAAAGAGAAAGTTGCAGCTTTCAGAAAGGGAGAAATTCCTTTATTAGTTACAACGACGATTTTGG
AGAGAGGAGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGACGGAAGAAGAAATATTTTCAGAAAGTGCACTCGTA
CAAATTGCAGGCCGGGTAGGTCGTAGTTTTGAAGAGCCGTATGGAGAGGTCATTTATTTTCATTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACACATTCGAAGTATGAACAAAAATGCGAAAGAACAAGGGTTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (106-254)

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.679	98.441	0.499
comFA	Latilactobacillus sakei subsp. sakei 23K	40.447	89.755	0.363