Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   F0362_RS05965 Genome accession   NZ_CP043830
Coordinates   1135633..1135809 (+) Length   58 a.a.
NCBI ID   WP_001003338.1    Uniprot ID   A0A1V6LL20
Organism   Bacillus sp. BS98     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1130633..1140809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0362_RS05945 (F0362_05945) clpC 1130956..1133556 (+) 2601 WP_016090927.1 ATP-dependent chaperone ClpB Regulator
  F0362_RS05950 (F0362_05950) - 1133593..1133775 (-) 183 WP_001211112.1 YjzD family protein -
  F0362_RS05955 (F0362_05955) - 1133932..1134666 (+) 735 WP_000028709.1 hypothetical protein -
  F0362_RS05960 (F0362_05960) - 1134696..1135568 (+) 873 WP_141521077.1 NAD(P)-dependent oxidoreductase -
  F0362_RS05965 (F0362_05965) comZ 1135633..1135809 (+) 177 WP_001003338.1 ComZ family protein Regulator
  F0362_RS05970 (F0362_05970) fabH 1136054..1136986 (+) 933 WP_001100553.1 beta-ketoacyl-ACP synthase III -
  F0362_RS05975 (F0362_05975) fabF 1137017..1138255 (+) 1239 WP_000412641.1 beta-ketoacyl-ACP synthase II -
  F0362_RS05980 (F0362_05980) - 1138362..1139153 (+) 792 WP_000539317.1 DUF2268 domain-containing protein -
  F0362_RS05985 (F0362_05985) - 1139296..1140042 (+) 747 WP_000966122.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6606.76 Da        Isoelectric Point: 4.4963

>NTDB_id=386061 F0362_RS05965 WP_001003338.1 1135633..1135809(+) (comZ) [Bacillus sp. BS98]
MNEKSMQFLQIAMKHLPEAKAILDSNGIELDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=386061 F0362_RS05965 WP_001003338.1 1135633..1135809(+) (comZ) [Bacillus sp. BS98]
ATGAACGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAGGCAAAGGCAATTTTAGATTCGAATGG
AATTGAGCTTGATATGGAGAAGGCACAACCAGTGTTAGAGTTATTAATGAAAGTTATGAATGAAGCATATGAGCTTGGGA
AAGCAGACAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V6LL20

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

63.636

94.828

0.603

Multiple sequence alignment