Detailed information NTG0386015

Bioinformatically predicted

Overview

• Name: recQ
• Type: Machinery gene
• Locus tag: HHJ62_RS09030
• Genome accession: NZ_CP051636
• Coordinates: 1892117..1893961 (+)
• Length: 614 a.a.
• NCBI ID: WP_035689220.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain ADL-AP17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1887117..1898961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ62_RS09010 (HHJ62_09010)	-	1888379..1889601 (+)	1223	WP_124994771.1	IS3 family transposase	-
HHJ62_RS09015 (HHJ62_09015)	-	1889650..1890063 (-)	414	WP_035689214.1	hypothetical protein	-
HHJ62_RS09020 (HHJ62_09020)	lysA	1890218..1891468 (-)	1251	WP_035689216.1	diaminopimelate decarboxylase	-
HHJ62_RS11835	-	1891479..1891598 (-)	120	WP_035689218.1	lipoprotein	-
HHJ62_RS09025 (HHJ62_09025)	cyaY	1891746..1892054 (+)	309	WP_017806692.1	iron donor protein CyaY	-
HHJ62_RS09030 (HHJ62_09030)	recQ	1892117..1893961 (+)	1845	WP_035689220.1	DNA helicase RecQ	Machinery gene
HHJ62_RS09035 (HHJ62_09035)	-	1894053..1895231 (+)	1179	WP_035689222.1	acetyl-CoA carboxylase biotin carboxylase subunit family protein	-
HHJ62_RS09040 (HHJ62_09040)	-	1895240..1895995 (+)	756	WP_035689223.1	esterase family protein	-
HHJ62_RS09045 (HHJ62_09045)	-	1896047..1896871 (-)	825	WP_035689225.1	alpha/beta hydrolase	-
HHJ62_RS09050 (HHJ62_09050)	gpt	1896923..1897387 (-)	465	WP_035689227.1	xanthine phosphoribosyltransferase	-

Sequence

Protein

• Length: 614 a.a.
• Molecular weight: 69783.07 Da
• Isoelectric Point: 8.5034

>NTDB_id=386015 HHJ62_RS09030 WP_035689220.1 1892117..1893961(+) (recQ) [Avibacterium paragallinarum strain ADL-AP17]
MEKNTALKVLNEVFGYQSFRNGQEEVINAALSHQDSLVIMATGNGKSLCYQIPALCFPGLTLVISPLISLMKDQVDQLLA
NGIEVDYLNSTQTFEQQQIVQNKAISGQLKLLYISPEKAMTTSFFQFISHCQVSFIAIDEAHCISQWGHDFRPEYTQLGG
LKRCFPNAPIMALTATADSATRQDILHHLQLDNPHIYIGSFDRPNIRYTLVEKFKPMEQLCQFVLGQKGKSGIVYCNSRN
KVERLAESLRKKGVAAQAYHAGMEASQREQVQRAFQRDNVQVVVATVAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRA
GRDDLPAEAVLFYEPADYAWLQKMLLEKPESPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQAPCKNCDICLDPP
KKYDGLIDAQKVMSTIYRVGQMFGVHYVIGVLRGMQNQKIKDNQHDQLSVYGIGKDKSKEYWQSVIRQLIHLGLVQQVMN
QFHSVLQLTENARPILRGEQPLELAMPRVSSIMTAQSAQKSAVQNYDKDLFARLRFLRKQIADKENIPPYIVFNDATLQE
MAQYQPTNKREMLQINGVGATKLERFGQAFLHIIQEHKSLSTKNSQPLKLSNEK

Nucleotide

• Length: 1845 bp

>NTDB_id=386015 HHJ62_RS09030 WP_035689220.1 1892117..1893961(+) (recQ) [Avibacterium paragallinarum strain ADL-AP17]
ATGGAAAAAAACACCGCACTTAAGGTTCTGAACGAGGTTTTTGGTTACCAATCTTTCCGCAATGGACAAGAAGAAGTGAT
CAACGCCGCCCTTTCACACCAAGATAGCCTTGTGATTATGGCAACGGGAAACGGAAAATCCCTTTGCTATCAAATTCCTG
CGCTTTGCTTTCCGGGGCTAACCTTAGTCATTTCACCGCTGATTTCCTTAATGAAAGATCAAGTGGATCAACTGCTTGCT
AACGGTATTGAAGTGGATTATCTCAATTCCACACAAACCTTTGAGCAGCAGCAAATTGTACAAAATAAGGCGATTTCAGG
GCAGCTCAAATTGCTTTATATTTCGCCCGAAAAGGCGATGACAACCAGTTTTTTCCAATTTATTTCTCATTGCCAAGTGA
GTTTTATTGCCATTGATGAAGCTCATTGTATTTCCCAATGGGGACACGATTTCCGCCCTGAATACACCCAACTTGGCGGC
TTAAAACGTTGCTTTCCAAATGCGCCGATAATGGCGCTCACAGCCACCGCAGACAGTGCCACAAGGCAAGATATTTTGCA
CCATTTGCAACTGGATAATCCGCATATTTATATCGGCAGCTTTGATCGCCCAAATATTCGCTACACTTTGGTGGAAAAAT
TTAAGCCAATGGAGCAGCTATGCCAATTTGTGCTAGGGCAGAAAGGCAAAAGTGGTATCGTTTATTGCAACAGCCGTAAC
AAAGTGGAACGCTTGGCGGAAAGCTTGCGCAAAAAAGGCGTGGCAGCACAAGCCTATCACGCAGGAATGGAGGCCAGCCA
GCGCGAGCAAGTTCAGCGTGCCTTTCAGCGTGATAATGTGCAAGTGGTGGTGGCAACCGTTGCTTTTGGAATGGGCATTA
ACAAATCCAACGTGCGATTTGTCGCCCATTTTGATTTGCCACGCAGTATTGAGGCGTATTACCAAGAAACAGGGCGCGCA
GGGCGTGATGATTTGCCTGCTGAAGCGGTGCTGTTTTACGAACCCGCCGATTATGCGTGGTTACAAAAAATGCTGCTGGA
AAAACCAGAAAGCCCGCAGCGCCAAATTGAACAGCATAAATTAGAAGCCATCGGCGAATTTGCCGAAAGTCAAACTTGCC
GCCGTTTAGTTTTGCTGAATTATTTTGGCGAACATCGCCAAGCGCCGTGCAAAAACTGCGATATTTGCCTTGATCCGCCG
AAAAAATATGACGGCTTAATTGATGCGCAAAAAGTGATGTCCACCATTTATCGTGTAGGGCAAATGTTTGGCGTGCATTA
TGTGATCGGCGTGCTGCGCGGAATGCAAAATCAAAAAATTAAAGATAACCAGCACGATCAGCTCAGCGTGTACGGCATTG
GCAAAGACAAAAGCAAAGAATATTGGCAATCGGTGATCCGCCAGCTGATTCATCTTGGGTTGGTGCAACAAGTGATGAAT
CAATTTCATTCGGTGTTACAACTGACGGAAAATGCGCGCCCAATTTTGCGTGGCGAACAGCCTTTAGAGCTGGCAATGCC
AAGGGTTTCTTCCATTATGACCGCACAAAGCGCACAAAAAAGTGCGGTGCAAAATTATGACAAAGATCTCTTTGCTCGCC
TGCGTTTCTTACGCAAACAAATTGCCGACAAAGAAAATATCCCCCCTTATATTGTGTTCAACGATGCCACTTTGCAAGAA
ATGGCACAATATCAACCCACCAACAAGCGCGAAATGCTACAAATCAACGGCGTGGGCGCAACCAAATTAGAGCGCTTTGG
ACAGGCATTCCTGCATATTATCCAAGAGCATAAATCACTCAGCACAAAAAACAGCCAACCGCTTAAATTGTCTAACGAAA
AATAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (218-322)

• DEAD/DEAH box helicase (DEAD) (22-179)

• HRDC domain (HRDC) (528-594)

• RecQ zinc-binding (RecQ_Zn_bind) (336-397)

• RQC domain (RQC) (399-509)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recQ	Bacillus subtilis subsp. subtilis str. 168	39.566	97.557	0.386