Detailed information NTG0386006

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: HHJ62_RS07855
• Genome accession: NZ_CP051636
• Coordinates: 1682940..1684169 (-)
• Length: 409 a.a.
• NCBI ID: WP_035687043.1
• Uniprot ID: A0AAE5THI0
• Organism: Avibacterium paragallinarum strain ADL-AP17
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1677940..1689169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHJ62_RS07830 (HHJ62_07830)	tadA	1678784..1679269 (+)	486	WP_046097356.1	tRNA adenosine(34) deaminase TadA	-
HHJ62_RS07835 (HHJ62_07835)	nagA	1679465..1680610 (-)	1146	WP_035687040.1	N-acetylglucosamine-6-phosphate deacetylase	-
HHJ62_RS07840 (HHJ62_07840)	nagB	1680625..1681428 (-)	804	WP_017807042.1	glucosamine-6-phosphate deaminase	-
HHJ62_RS07845 (HHJ62_07845)	-	1681711..1682529 (+)	819	WP_017807041.1	DNA ligase	-
HHJ62_RS07850 (HHJ62_07850)	-	1682571..1682711 (-)	141	Protein_1527	radical SAM protein	-
HHJ62_RS07855 (HHJ62_07855)	kpsS	1682940..1684169 (-)	1230	WP_035687043.1	capsule biosynthesis protein	Regulator
HHJ62_RS07860 (HHJ62_07860)	-	1684199..1686229 (-)	2031	WP_035687045.1	capsular polysaccharide biosynthesis protein	-
HHJ62_RS07865 (HHJ62_07865)	-	1686547..1688223 (+)	1677	WP_035695974.1	hypothetical protein	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 48199.44 Da
• Isoelectric Point: 8.0587

>NTDB_id=386006 HHJ62_RS07855 WP_035687043.1 1682940..1684169(-) (kpsS) [Avibacterium paragallinarum strain ADL-AP17]
MIVDNLTELVTSSQRILLLQGPIGPFFKYFADWLVNVQGKYVYKLNFNAGDKFYFSSALEQQSIIDYRDTFENFEAFLLQ
LCQENEIDALVCFGDTRPYHQVAKRVSEQLQYSFWAFEEGYFRPHYVTLEKEGVNAYSTLPRNKQFFLQQAENLTEYIQP
IPIAKGFFPMAKLATQYYVVARHREEQFPHYKHHRVYNLNYYIKLWLISGLKRVCRYVKEKRFIRKIEQNKLGDFYILPL
QVYDDSQVKVHCDFDSVEAFLIYVLNSFVKNAPKSLSLVIKHHPMDRGFISYKNVIKCYLSEHPELQGRVFYVYDVPMPV
LLRYGKAMVTLNSTSGLSALIHNMPVMTLGLANYNIPDITHQGTLEEFWHTPQQPDEKAFKAYHLYHLHKTQINGSFYNK
VILPEEKIE

Nucleotide

• Length: 1230 bp

>NTDB_id=386006 HHJ62_RS07855 WP_035687043.1 1682940..1684169(-) (kpsS) [Avibacterium paragallinarum strain ADL-AP17]
ATGATTGTGGATAACCTCACTGAGCTAGTAACTTCATCACAACGAATTTTGTTATTGCAAGGTCCAATTGGTCCTTTTTT
TAAGTATTTTGCAGATTGGCTAGTTAACGTTCAAGGCAAATATGTTTATAAATTGAACTTTAATGCCGGAGATAAATTTT
ATTTTTCTTCTGCGTTAGAACAACAATCTATTATTGATTATCGTGATACCTTTGAGAATTTTGAAGCCTTTCTTTTGCAG
TTGTGTCAAGAAAATGAAATTGATGCTTTGGTATGTTTTGGTGATACTCGCCCCTATCATCAAGTTGCTAAAAGAGTATC
AGAACAATTGCAATATTCATTTTGGGCATTTGAAGAAGGCTATTTTCGCCCTCATTATGTTACCCTAGAAAAAGAGGGCG
TAAATGCCTATTCAACGCTTCCGAGAAATAAACAATTCTTTCTGCAACAAGCAGAAAACTTAACAGAATATATACAGCCA
ATTCCTATTGCAAAAGGTTTTTTCCCGATGGCTAAATTAGCCACCCAATATTATGTCGTTGCTAGACATAGGGAAGAACA
GTTTCCTCATTATAAACATCACCGCGTTTATAACCTCAATTATTATATAAAATTATGGCTTATTTCAGGGCTAAAACGTG
TTTGTCGTTATGTGAAAGAAAAGCGATTTATTCGCAAAATTGAGCAAAATAAATTAGGTGATTTTTATATATTACCTTTA
CAAGTTTATGATGATAGCCAAGTGAAAGTACATTGTGATTTTGATAGTGTTGAAGCATTTTTAATCTATGTACTGAATTC
CTTTGTAAAAAATGCTCCAAAGTCATTGAGTTTGGTAATCAAGCATCATCCAATGGATCGCGGGTTTATTAGCTATAAAA
ATGTGATTAAATGCTATTTATCTGAACATCCCGAACTGCAAGGGCGGGTATTCTACGTCTATGATGTACCAATGCCTGTT
TTACTTCGATATGGAAAAGCAATGGTAACATTGAACAGTACGAGTGGACTATCTGCACTCATTCATAATATGCCTGTAAT
GACGCTAGGACTAGCCAATTATAATATTCCTGATATTACACACCAAGGAACACTAGAAGAATTTTGGCATACTCCACAAC
AACCCGATGAAAAAGCATTTAAGGCATACCATCTCTACCATTTGCATAAAACCCAAATTAATGGCAGTTTTTATAATAAA
GTGATCTTACCAGAAGAGAAAATTGAATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (88-398)

3D structure

• AlphaFold DB: A0AAE5THI0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	37.28	97.066	0.362