Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | HHM65_RS00800 | Genome accession | NZ_CP051624 |
| Coordinates | 129716..129961 (+) | Length | 81 a.a. |
| NCBI ID | WP_003058569.1 | Uniprot ID | A0ABU0A7C2 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A74 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 124716..134961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHM65_RS00775 (HHM65_00780) | - | 126623..126988 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| HHM65_RS00780 (HHM65_00785) | comGA/cglA | 127069..128010 (+) | 942 | WP_170078124.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HHM65_RS00785 (HHM65_00790) | comGB | 127946..128977 (+) | 1032 | WP_015057201.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| HHM65_RS00790 (HHM65_00795) | comGC | 128979..129305 (+) | 327 | WP_003055259.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HHM65_RS00795 (HHM65_00800) | comGD | 129280..129708 (+) | 429 | WP_041781473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| HHM65_RS00800 (HHM65_00805) | comGE | 129716..129961 (+) | 246 | WP_003058569.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| HHM65_RS00805 (HHM65_00810) | comGF | 129942..130382 (+) | 441 | WP_170078125.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| HHM65_RS00810 (HHM65_00815) | comGG | 130405..130734 (+) | 330 | WP_003058539.1 | competence type IV pilus minor pilin ComGG | - |
| HHM65_RS00815 (HHM65_00820) | comGH | 130797..131750 (+) | 954 | WP_003060701.1 | class I SAM-dependent methyltransferase | Machinery gene |
| HHM65_RS00820 (HHM65_00825) | - | 131809..133005 (+) | 1197 | WP_015057203.1 | acetate kinase | - |
| HHM65_RS00825 (HHM65_00830) | - | 133311..133517 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| HHM65_RS00830 (HHM65_00835) | - | 133620..134300 (+) | 681 | WP_012766451.1 | type II CAAX endopeptidase family protein | - |
| HHM65_RS00835 (HHM65_00840) | - | 134318..134755 (+) | 438 | WP_012766452.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 81 a.a. Molecular weight: 9280.82 Da Isoelectric Point: 9.6222
>NTDB_id=385876 HHM65_RS00800 WP_003058569.1 129716..129961(+) (comGE) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A74]
MATGLLVAIVILVLTSLEQSQTRLTYYRSQQEKLNLALMAVQTGQASLNMNDYRLTVLRTEKTLIVRDQEGEVIRIEKKD
R
MATGLLVAIVILVLTSLEQSQTRLTYYRSQQEKLNLALMAVQTGQASLNMNDYRLTVLRTEKTLIVRDQEGEVIRIEKKD
R
Nucleotide
Download Length: 246 bp
>NTDB_id=385876 HHM65_RS00800 WP_003058569.1 129716..129961(+) (comGE) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A74]
ATGGCAACAGGACTCCTCGTAGCTATTGTCATACTGGTTCTAACAAGTTTGGAGCAAAGTCAGACAAGGTTGACATATTA
TCGCAGCCAACAAGAAAAGCTCAACCTAGCTCTGATGGCAGTACAAACTGGTCAAGCGTCTCTCAATATGAATGATTATC
GTCTGACGGTTTTACGCACAGAAAAAACACTTATCGTTAGGGATCAGGAAGGAGAAGTTATTAGAATTGAAAAAAAGGAC
AGGTAG
ATGGCAACAGGACTCCTCGTAGCTATTGTCATACTGGTTCTAACAAGTTTGGAGCAAAGTCAGACAAGGTTGACATATTA
TCGCAGCCAACAAGAAAAGCTCAACCTAGCTCTGATGGCAGTACAAACTGGTCAAGCGTCTCTCAATATGAATGATTATC
GTCTGACGGTTTTACGCACAGAAAAAACACTTATCGTTAGGGATCAGGAAGGAGAAGTTATTAGAATTGAAAAAAAGGAC
AGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Streptococcus mutans UA140 |
41.772 |
97.531 |
0.407 |
| comGE | Streptococcus mutans UA159 |
41.772 |
97.531 |
0.407 |