Detailed information NTG0385575

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: F0358_RS15850
• Genome accession: NZ_CP043634
• Coordinates: 3330817..3331758 (-)
• Length: 313 a.a.
• NCBI ID: WP_150433059.1
• Uniprot ID: -
• Organism: Empedobacter brevis strain SE1-3
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3325817..3336758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0358_RS15820 (F0358_15825)	-	3326102..3326917 (+)	816	WP_150433054.1	class I SAM-dependent methyltransferase	-
F0358_RS15825 (F0358_15830)	-	3326983..3327291 (-)	309	WP_150433055.1	cupin domain-containing protein	-
F0358_RS15830 (F0358_15835)	-	3327325..3327855 (-)	531	WP_260397446.1	siderophore-interacting protein	-
F0358_RS17575	-	3327829..3328135 (-)	307	Protein_3088	siderophore-interacting protein	-
F0358_RS15835 (F0358_15840)	-	3328153..3329085 (-)	933	WP_150433056.1	siderophore ABC transporter substrate-binding protein	-
F0358_RS15840 (F0358_15845)	-	3329102..3329863 (-)	762	WP_150433057.1	ABC transporter ATP-binding protein	-
F0358_RS15845 (F0358_15850)	-	3329860..3330813 (-)	954	WP_150433058.1	iron chelate uptake ABC transporter family permease subunit	-
F0358_RS15850 (F0358_15855)	ceuB	3330817..3331758 (-)	942	WP_150433059.1	ABC transporter permease	Machinery gene
F0358_RS15855 (F0358_15860)	-	3331965..3332411 (-)	447	WP_150433060.1	GNAT family N-acetyltransferase	-
F0358_RS15860 (F0358_15865)	-	3332649..3333539 (-)	891	WP_150433061.1	dihydrodipicolinate synthase family protein	-
F0358_RS15865 (F0358_15870)	-	3333556..3334056 (-)	501	WP_019976730.1	cupin domain-containing protein	-
F0358_RS15870 (F0358_15875)	-	3334158..3335579 (+)	1422	WP_150433062.1	PLP-dependent aminotransferase family protein	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 34721.03 Da
• Isoelectric Point: 9.9631

>NTDB_id=385575 F0358_RS15850 WP_150433059.1 3330817..3331758(-) (ceuB) [Empedobacter brevis strain SE1-3]
MRYLLLVLLLFLLAFLSLFVGAKEVLIADILNFDEEKIRILGVSRFPRTIALILSGIGLSIAGFIMQQISQNKFVSPSTA
GTLDAAKLGILFSIIFFQQTSIFGKTIIALLFTLLSCVLFILMVRKIRTKNIIFIPLIGIMYGNILNAIATFFAYKNRIV
QNMQGWMMGDFSSVLQGNYESVYFILPAVVISYLYANEFVVVGMGEHFSKNLGISYHNIVYIGLFCIALTVSVTVVTVGV
IPFLGLIVPNVVSMIYGDNLKRTLPITAIFGAIFLLFSDIIGRLVIFPYELPIGLTVGVLGGIFFLILILKRR

Nucleotide

• Length: 942 bp

>NTDB_id=385575 F0358_RS15850 WP_150433059.1 3330817..3331758(-) (ceuB) [Empedobacter brevis strain SE1-3]
ATGCGTTATTTACTATTGGTTTTATTATTATTTCTTTTAGCCTTTTTGTCCCTGTTTGTAGGTGCCAAAGAAGTGTTGAT
TGCAGATATTTTAAATTTCGACGAAGAAAAAATAAGAATATTGGGTGTGAGTCGTTTCCCTCGTACTATAGCATTGATTT
TGTCCGGAATAGGATTAAGTATAGCAGGATTTATCATGCAGCAAATTTCACAAAATAAATTTGTTTCCCCTTCTACAGCA
GGAACTTTAGATGCTGCAAAATTGGGCATCTTGTTCAGTATTATTTTTTTCCAGCAAACATCAATTTTCGGAAAAACAAT
CATTGCTTTATTGTTTACCCTGCTCTCATGTGTATTGTTTATTTTAATGGTAAGAAAAATACGTACGAAGAATATCATTT
TTATTCCGCTTATTGGAATTATGTATGGAAATATTCTCAATGCAATTGCAACTTTTTTTGCCTACAAAAATCGAATTGTA
CAAAATATGCAAGGCTGGATGATGGGAGATTTTTCATCCGTTTTACAGGGAAATTACGAATCGGTTTATTTTATTTTACC
AGCAGTTGTTATTTCCTACTTATATGCCAATGAATTTGTGGTGGTTGGAATGGGAGAGCATTTTTCAAAAAACTTGGGAA
TCAGTTACCATAATATTGTCTACATTGGTTTATTCTGTATTGCGCTTACAGTTAGTGTGACGGTGGTTACTGTCGGGGTT
ATTCCCTTTTTAGGATTAATTGTTCCGAATGTTGTGAGTATGATATATGGCGATAACTTAAAACGTACTTTACCTATTAC
AGCAATTTTTGGTGCCATCTTTTTATTGTTTTCTGATATTATTGGTCGACTGGTTATTTTTCCCTACGAATTGCCAATAG
GCTTAACAGTTGGTGTCCTAGGAGGAATATTTTTTTTAATCTTAATCTTAAAACGTAGATAA

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (9-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	50.325	98.403	0.495