Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F0Q09_RS05910 Genome accession   NZ_CP043576
Coordinates   1289473..1289874 (-) Length   133 a.a.
NCBI ID   WP_010955560.1    Uniprot ID   -
Organism   Pseudomonas putida strain T25-27     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1284473..1294874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0Q09_RS05895 - 1286437..1288461 (-) 2025 WP_223817433.1 methyl-accepting chemotaxis protein -
  F0Q09_RS05900 - 1288509..1289063 (-) 555 WP_003249330.1 chemotaxis protein CheW -
  F0Q09_RS05905 pilH 1289060..1289425 (-) 366 WP_003249327.1 twitching motility response regulator PilH -
  F0Q09_RS05910 pilG 1289473..1289874 (-) 402 WP_010955560.1 response regulator Regulator
  F0Q09_RS05915 gshB 1290113..1291066 (+) 954 WP_003249322.1 glutathione synthase -
  F0Q09_RS05920 - 1291158..1292063 (+) 906 WP_003249319.1 energy transducer TonB -
  F0Q09_RS05925 - 1292228..1292797 (+) 570 WP_003249318.1 YqgE/AlgH family protein -
  F0Q09_RS05930 ruvX 1292797..1293222 (+) 426 WP_003249316.1 Holliday junction resolvase RuvX -
  F0Q09_RS05935 pyrR 1293272..1293790 (+) 519 WP_020191541.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  F0Q09_RS05940 - 1293803..1294807 (+) 1005 WP_003249311.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14602.85 Da        Isoelectric Point: 6.4772

>NTDB_id=385268 F0Q09_RS05910 WP_010955560.1 1289473..1289874(-) (pilG) [Pseudomonas putida strain T25-27]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAPQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=385268 F0Q09_RS05910 WP_010955560.1 1289473..1289874(-) (pilG) [Pseudomonas putida strain T25-27]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCATCAGCCCAGTATCATTTTCG
TCGATGTGCTGATGCCACGCCTGGACGGCTACCAGACCTGCGCGGTAATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTTATCCTGCTGTCGTCCCGCGATGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGATCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCATGTGCCCGGGTTTGCCGCACCTCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment