Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F0Q02_RS22230 Genome accession   NZ_CP043573
Coordinates   4868362..4868766 (-) Length   134 a.a.
NCBI ID   WP_003051508.1    Uniprot ID   A0A5N7WMG8
Organism   Comamonas testosteroni strain R5-28     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4863362..4873766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0Q02_RS22215 - 4865194..4867437 (-) 2244 WP_003051514.1 methyl-accepting chemotaxis protein -
  F0Q02_RS22220 - 4867457..4867984 (-) 528 WP_003051512.1 chemotaxis protein CheW -
  F0Q02_RS22225 - 4868000..4868362 (-) 363 WP_003051510.1 response regulator -
  F0Q02_RS22230 pilG 4868362..4868766 (-) 405 WP_003051508.1 response regulator Regulator
  F0Q02_RS22235 - 4868818..4868970 (-) 153 WP_034399566.1 rubredoxin -
  F0Q02_RS22240 thiD 4869086..4870054 (+) 969 WP_003051503.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  F0Q02_RS22245 hemL 4870038..4871342 (+) 1305 WP_003051500.1 glutamate-1-semialdehyde 2,1-aminomutase -
  F0Q02_RS22250 - 4871505..4872140 (-) 636 WP_003051497.1 DNA-3-methyladenine glycosylase I -
  F0Q02_RS22255 - 4872279..4873763 (-) 1485 WP_003051494.1 amino acid permease -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14721.99 Da        Isoelectric Point: 6.2600

>NTDB_id=385236 F0Q02_RS22230 WP_003051508.1 4868362..4868766(-) (pilG) [Comamonas testosteroni strain R5-28]
MTASAAPLRVLVVDDSNTIRRSAEIFLKQGGYEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPIVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFALQAADVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=385236 F0Q02_RS22230 WP_003051508.1 4868362..4868766(-) (pilG) [Comamonas testosteroni strain R5-28]
GTGACAGCATCTGCTGCGCCTTTGCGCGTTCTGGTCGTGGATGACAGCAATACCATCCGCCGCAGCGCTGAAATTTTCCT
CAAGCAAGGTGGTTACGAGGTTCTTCTGGCCGATGACGGCTTCGATGCCTTGTCCAAGGTCAACGACTACCAGCCGCAGC
TCATCTTCTGCGACATTCTGATGCCCAAGCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAATGCGCGTTTTGCC
AATACGCCCATCGTGATGCTGTCATCCAAGGACGGTGTCTTCGACAAGGCCCGTGGACGCATGGTGGGCTGTCAGGACTA
TCTGACCAAACCCTTCACCAAAGATCAATTGCTGCAAGCCGTACAACAGTTCGCGCTGCAAGCTGCAGATGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5N7WMG8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.265

87.313

0.5

Multiple sequence alignment