Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F0P98_RS04835 Genome accession   NZ_CP043570
Coordinates   1095045..1095446 (+) Length   133 a.a.
NCBI ID   WP_054667142.1    Uniprot ID   -
Organism   Stenotrophomonas acidaminiphila strain T25-65     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1090045..1100446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0P98_RS04820 - 1090974..1092920 (+) 1947 WP_182212782.1 prolyl oligopeptidase family serine peptidase -
  F0P98_RS04825 - 1092960..1093850 (-) 891 WP_056931285.1 energy transducer TonB -
  F0P98_RS04830 gshB 1093847..1094797 (-) 951 WP_056931286.1 glutathione synthase -
  F0P98_RS04835 pilG 1095045..1095446 (+) 402 WP_054667142.1 twitching motility response regulator PilG Regulator
  F0P98_RS04840 - 1095463..1095825 (+) 363 WP_054667141.1 response regulator -
  F0P98_RS04845 - 1095825..1096355 (+) 531 WP_054667139.1 chemotaxis protein CheW -
  F0P98_RS04850 - 1096397..1098433 (+) 2037 WP_054667137.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14644.06 Da        Isoelectric Point: 6.3482

>NTDB_id=385210 F0P98_RS04835 WP_054667142.1 1095045..1095446(+) (pilG) [Stenotrophomonas acidaminiphila strain T25-65]
MVENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=385210 F0P98_RS04835 WP_054667142.1 1095045..1095446(+) (pilG) [Stenotrophomonas acidaminiphila strain T25-65]
ATGGTTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGGTTGAAGGTGATGGTCATCGACGATTCGAAAACCATCCGCCG
CACCGCCGAGACACTGCTCAAGCGCGAGGGCTGCGAGGTCGTGACCGCGACCGACGGTTTCGAGGCATTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGGCTGGATGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGTCCACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCCGAGCAGTACCTGACCAAGCCTTTCACCCGCGAAGAACTGCTGGGCGCCATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment