Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F0P97_RS23205 Genome accession   NZ_CP043568
Coordinates   5036013..5036417 (-) Length   134 a.a.
NCBI ID   WP_003071158.1    Uniprot ID   A0A5S4T294
Organism   Comamonas testosteroni strain T5-67     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5031013..5041417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0P97_RS23190 - 5032845..5035088 (-) 2244 WP_182284491.1 methyl-accepting chemotaxis protein -
  F0P97_RS23195 - 5035108..5035635 (-) 528 WP_182284492.1 chemotaxis protein CheW -
  F0P97_RS23200 - 5035651..5036013 (-) 363 WP_182284493.1 response regulator -
  F0P97_RS23205 pilG 5036013..5036417 (-) 405 WP_003071158.1 response regulator Regulator
  F0P97_RS23210 - 5036468..5036620 (-) 153 WP_034399566.1 rubredoxin -
  F0P97_RS23215 thiD 5036736..5037704 (+) 969 WP_182284494.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  F0P97_RS23220 hemL 5037688..5038992 (+) 1305 WP_182284495.1 glutamate-1-semialdehyde 2,1-aminomutase -
  F0P97_RS23225 - 5039143..5040915 (+) 1773 WP_182284496.1 alkaline phosphatase D family protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14667.90 Da        Isoelectric Point: 6.9230

>NTDB_id=385197 F0P97_RS23205 WP_003071158.1 5036013..5036417(-) (pilG) [Comamonas testosteroni strain T5-67]
MTASGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFALQAADVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=385197 F0P97_RS23205 WP_003071158.1 5036013..5036417(-) (pilG) [Comamonas testosteroni strain T5-67]
GTGACAGCATCTGGTGCGCCTTTGCGCGTTCTGGTCGTGGATGACAGCAACACCATCCGCCGCAGCGCTGAAATTTTCCT
CAAGCAAGGTGGTCACGAAGTTCTTCTGGCCGATGATGGCTTCGATGCCCTGTCCAAGGTCAATGACTACCAGCCCCAGC
TCATCTTCTGCGACATTCTGATGCCCAAGCTCGATGGCTATCAGACCTGCGCCATCATCAAGCGCAATGCTCGCTTTGCC
AATACGCCCGTCGTGATGCTGTCATCCAAGGACGGTGTATTCGACAAGGCTCGAGGTCGCATGGTGGGCTGCCAAGACTA
TCTGACCAAACCATTTACCAAAGATCAATTGCTGCAAGCCGTACAACAGTTCGCGCTGCAAGCTGCAGATGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5S4T294

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.621

86.567

0.507

Multiple sequence alignment