Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F0P95_RS15835 Genome accession   NZ_CP043567
Coordinates   3470452..3470853 (-) Length   133 a.a.
NCBI ID   WP_054667142.1    Uniprot ID   -
Organism   Stenotrophomonas acidaminiphila strain T0-18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3465452..3475853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0P95_RS15820 - 3467465..3469501 (-) 2037 WP_182335027.1 methyl-accepting chemotaxis protein -
  F0P95_RS15825 - 3469543..3470073 (-) 531 WP_182335028.1 chemotaxis protein CheW -
  F0P95_RS15830 - 3470073..3470435 (-) 363 WP_055771240.1 response regulator -
  F0P95_RS15835 pilG 3470452..3470853 (-) 402 WP_054667142.1 twitching motility response regulator PilG Regulator
  F0P95_RS15840 gshB 3471101..3472051 (+) 951 WP_182337048.1 glutathione synthase -
  F0P95_RS15845 - 3472048..3472938 (+) 891 WP_182335029.1 energy transducer TonB -
  F0P95_RS15850 - 3472978..3474924 (-) 1947 WP_182335030.1 prolyl oligopeptidase family serine peptidase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14644.06 Da        Isoelectric Point: 6.3482

>NTDB_id=385181 F0P95_RS15835 WP_054667142.1 3470452..3470853(-) (pilG) [Stenotrophomonas acidaminiphila strain T0-18]
MVENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=385181 F0P95_RS15835 WP_054667142.1 3470452..3470853(-) (pilG) [Stenotrophomonas acidaminiphila strain T0-18]
ATGGTTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGGTTGAAGGTGATGGTCATCGACGATTCGAAGACCATCCGCCG
TACCGCCGAGACACTGCTCAAGCGCGAGGGCTGCGAGGTCGTGACCGCGACCGACGGCTTCGAGGCATTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGGCTGGATGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGTCCACGCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCCGAGCAGTACCTGACCAAGCCTTTCACCCGCGAAGAACTACTGGGCGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment