Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   EVS87_RS06955 Genome accession   NZ_CP043559
Coordinates   1345879..1346460 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain CHB19     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1340879..1351460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EVS87_RS06930 (EVS87_006930) - 1341544..1342722 (+) 1179 WP_052472187.1 N-acetyldiaminopimelate deacetylase -
  EVS87_RS06935 (EVS87_006935) - 1342773..1343015 (+) 243 WP_024424725.1 YkuS family protein -
  EVS87_RS06940 (EVS87_006940) - 1343038..1343847 (-) 810 WP_135008956.1 mechanosensitive ion channel family protein -
  EVS87_RS06945 (EVS87_006945) ahpA 1344119..1344661 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  EVS87_RS06950 (EVS87_006950) - 1344938..1345396 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  EVS87_RS06955 (EVS87_006955) rok 1345879..1346460 (+) 582 WP_007498648.1 hypothetical protein Regulator
  EVS87_RS06960 (EVS87_006960) - 1346523..1347440 (-) 918 WP_135008955.1 sigmaE regulated sporulation protein -
  EVS87_RS06965 (EVS87_006965) - 1347524..1348105 (+) 582 WP_188092750.1 molybdenum cofactor guanylyltransferase -
  EVS87_RS06970 (EVS87_006970) - 1348135..1349151 (+) 1017 WP_113766986.1 thiazole biosynthesis adenylyltransferase ThiF -
  EVS87_RS06975 (EVS87_006975) glp 1349161..1350435 (+) 1275 WP_188092751.1 gephyrin-like molybdotransferase Glp -
  EVS87_RS06980 (EVS87_006980) mobB 1350417..1350944 (+) 528 WP_041507370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  EVS87_RS06985 (EVS87_006985) - 1350937..1351428 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=385105 EVS87_RS06955 WP_007498648.1 1345879..1346460(+) (rok) [Bacillus altitudinis strain CHB19]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=385105 EVS87_RS06955 WP_007498648.1 1345879..1346460(+) (rok) [Bacillus altitudinis strain CHB19]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment