Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   EVS87_RS05305 Genome accession   NZ_CP043559
Coordinates   1029141..1030091 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain CHB19     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1024141..1035091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EVS87_RS05285 (EVS87_005285) - 1025381..1025863 (+) 483 WP_008348662.1 hypothetical protein -
  EVS87_RS05290 (EVS87_005290) - 1025894..1027333 (-) 1440 WP_188092748.1 PLP-dependent aminotransferase family protein -
  EVS87_RS05295 (EVS87_005295) - 1027476..1028645 (+) 1170 WP_058337508.1 MFS transporter -
  EVS87_RS05300 (EVS87_005300) - 1028708..1028986 (+) 279 WP_135009039.1 barstar family protein -
  EVS87_RS05305 (EVS87_005305) ceuB 1029141..1030091 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  EVS87_RS05310 (EVS87_005310) - 1030084..1031034 (+) 951 WP_135009038.1 iron chelate uptake ABC transporter family permease subunit -
  EVS87_RS05315 (EVS87_005315) - 1031025..1031783 (+) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  EVS87_RS05320 (EVS87_005320) - 1031806..1032750 (+) 945 WP_045034716.1 siderophore ABC transporter substrate-binding protein -
  EVS87_RS05325 (EVS87_005325) - 1032890..1033846 (+) 957 WP_007499147.1 LCP family protein -
  EVS87_RS05335 (EVS87_005335) - 1034079..1034513 (-) 435 WP_039167431.1 hypothetical protein -
  EVS87_RS05340 (EVS87_005340) - 1034599..1034960 (-) 362 Protein_1014 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=385092 EVS87_RS05305 WP_039167438.1 1029141..1030091(+) (ceuB) [Bacillus altitudinis strain CHB19]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=385092 EVS87_RS05305 WP_039167438.1 1029141..1030091(+) (ceuB) [Bacillus altitudinis strain CHB19]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTTACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment