Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   F0M21_RS19740 Genome accession   NZ_CP043546
Coordinates   352400..352564 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus velezensis strain SYP-B637     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 347400..357564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F0M21_RS19735 srfAB 349345..352335 (+) 2991 Protein_320 surfactin non-ribosomal peptide synthetase SrfAB -
  F0M21_RS19740 comS 352400..352564 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=385013 F0M21_RS19740 WP_012116773.1 352400..352564(+) (comS) [Bacillus velezensis strain SYP-B637]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=385013 F0M21_RS19740 WP_012116773.1 352400..352564(+) (comS) [Bacillus velezensis strain SYP-B637]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment