Detailed information NTG0038480

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BAMF_RS29470
• Genome accession: NC_014551
• Coordinates: 1769315..1770358 (+)
• Length: 347 a.a.
• NCBI ID: WP_013352318.1
• Uniprot ID: Q8GJG2
• Organism: Bacillus amyloliquefaciens DSM 7 = ATCC 23350
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1764315..1775358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAMF_RS29440 (BAMF_1760)	ymfI	1764334..1765062 (+)	729	WP_013352313.1	elongation factor P 5-aminopentanone reductase	-
BAMF_RS29445 (BAMF_1761)	-	1765138..1765395 (+)	258	WP_003154150.1	DUF3243 domain-containing protein	-
BAMF_RS29450 (BAMF_1762)	-	1765523..1766314 (+)	792	WP_013352314.1	DUF3388 domain-containing protein	-
BAMF_RS29455 (BAMF_1763)	-	1766333..1767220 (+)	888	WP_013352315.1	helix-turn-helix domain-containing protein	-
BAMF_RS29460 (BAMF_1764)	pgsA	1767294..1767875 (+)	582	WP_013352316.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BAMF_RS29465 (BAMF_1765)	cinA	1767893..1769143 (+)	1251	WP_013352317.1	competence/damage-inducible protein A	Machinery gene
BAMF_RS29470 (BAMF_1766)	recA	1769315..1770358 (+)	1044	WP_013352318.1	recombinase RecA	Machinery gene
BAMF_RS29475 (BAMF_1767)	-	1770525..1771706 (+)	1182	WP_013352319.1	serine hydrolase domain-containing protein	-
BAMF_RS29480 (BAMF_1768)	rny	1771997..1773556 (+)	1560	WP_003154140.1	ribonuclease Y	-
BAMF_RS29485 (BAMF_1769)	ymdB	1773618..1774412 (+)	795	WP_013352320.1	2',3'-cyclic-nucleotide 2'-phosphodiesterase	-
BAMF_RS29490 (BAMF_1770)	spoVS	1774612..1774872 (+)	261	WP_003154135.1	stage V sporulation protein SpoVS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37961.15 Da
• Isoelectric Point: 4.7528

>NTDB_id=38480 BAMF_RS29470 WP_013352318.1 1769315..1770358(+) (recA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQEKGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
RIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGRENAKQFLKENKDIMLMIQEQ
IREHYGLDNNGVTEKAEEVQEELEFEE

Nucleotide

• Length: 1044 bp

>NTDB_id=38480 BAMF_RS29470 WP_013352318.1 1769315..1770358(+) (recA) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAGCAAATAGAAAAACAATTCGGCAAAGGTTCCATCATGAAGCT
CGGAGAAAAAACGGATACAAGAATTTCAACGGTGCCGAGCGGTTCCCTTGCACTTGATACCGCTCTCGGAATAGGCGGAT
ACCCGCGCGGACGGATTATTGAAGTATACGGACCTGAAAGCTCAGGTAAAACGACTGTAGCGCTTCACGCAATCGCTGAG
GTTCAGGAAAAAGGCGGACAGGCAGCATTTATTGATGCCGAGCATGCTCTTGATCCTGTGTACGCGCAAAAGCTCGGTGT
CAATATCGAAGAGCTGCTGCTTTCTCAGCCGGATACGGGAGAGCAGGCGCTGGAGATTGCTGAAGCGCTGGTGCGAAGCG
GAGCTGTCGATATCGTAGTCGTTGACTCTGTTGCGGCGCTTGTTCCAAAAGCTGAAATTGAAGGTGACATGGGTGATTCA
CACGTCGGTTTACAGGCGCGTCTCATGTCTCAGGCGCTCCGTAAGCTTTCCGGCGCCATCAATAAATCTAAAACAATCGC
AATCTTTATTAACCAGATTCGTGAAAAAGTCGGCGTTATGTTCGGAAATCCGGAGACGACACCGGGCGGCCGCGCGCTGA
AATTCTATTCTTCCGTGCGTCTTGAAGTGCGCCGTGCCGAGCAATTAAAGCAGGGCAACGACGTTATGGGGAATAAAACG
AGAATTAAAGTCGTAAAAAACAAAGTCGCTCCTCCGTTCCGTACGGCTGAAGTGGACATTATGTACGGTGAAGGAATCTC
CAAAGAAGGGGAAATCATCGACCTTGGAACTGAACTTGATATCGTGCAGAAAAGCGGCTCGTGGTATTCTTATGAAGAAG
AACGCCTCGGACAGGGCCGTGAAAACGCCAAGCAGTTCTTAAAAGAAAATAAAGACATCATGCTGATGATTCAAGAACAA
ATCCGTGAACATTACGGTTTGGACAATAACGGTGTTACGGAAAAAGCGGAAGAAGTTCAGGAAGAGCTTGAATTCGAAGA
ATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: Q8GJG2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	97.701	100	0.98
recA	Latilactobacillus sakei subsp. sakei 23K	74.924	94.236	0.706
recA	Streptococcus pneumoniae D39	67.251	98.559	0.663
recA	Streptococcus pneumoniae Rx1	67.251	98.559	0.663
recA	Streptococcus pneumoniae R6	67.251	98.559	0.663
recA	Streptococcus pneumoniae TIGR4	67.251	98.559	0.663
recA	Streptococcus mutans UA159	65.988	99.135	0.654
recA	Streptococcus mitis NCTC 12261	68.485	95.101	0.651
recA	Streptococcus mitis SK321	68.182	95.101	0.648
recA	Streptococcus pyogenes NZ131	67.378	94.524	0.637
recA	Lactococcus lactis subsp. cremoris KW2	65.455	95.101	0.622
recA	Helicobacter pylori 26695	62.974	98.847	0.622
recA	Helicobacter pylori strain NCTC11637	62.974	98.847	0.622
recA	Neisseria gonorrhoeae strain FA1090	65.443	94.236	0.617
recA	Neisseria gonorrhoeae MS11	65.443	94.236	0.617
recA	Neisseria gonorrhoeae MS11	65.443	94.236	0.617
recA	Ralstonia pseudosolanacearum GMI1000	64.634	94.524	0.611
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.609	94.236	0.599
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.609	94.236	0.599
recA	Glaesserella parasuis strain SC1401	60.29	99.424	0.599
recA	Pseudomonas stutzeri DSM 10701	60.997	98.271	0.599
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.174	92.507	0.594
recA	Vibrio cholerae strain A1552	64.174	92.507	0.594
recA	Acinetobacter baumannii D1279779	59.42	99.424	0.591
recA	Acinetobacter baylyi ADP1	59.42	99.424	0.591
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.372	93.084	0.562