Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FZO55_RS15150 Genome accession   NZ_CP043511
Coordinates   3093564..3094190 (-) Length   208 a.a.
NCBI ID   WP_058690680.1    Uniprot ID   -
Organism   Enterobacter kobei strain EB_P8_L5_01.19     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3088564..3099190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZO55_RS15135 (FZO55_15135) helD 3088801..3090855 (-) 2055 WP_058690683.1 DNA helicase IV -
  FZO55_RS15140 (FZO55_15140) - 3090979..3091425 (+) 447 WP_058690682.1 YccF domain-containing protein -
  FZO55_RS15145 (FZO55_15145) yccS 3091445..3093607 (+) 2163 WP_058690681.1 YccS family putative transporter -
  FZO55_RS15150 (FZO55_15150) sxy/tfoX 3093564..3094190 (-) 627 WP_058690680.1 TfoX/Sxy family DNA transformation protein Regulator
  FZO55_RS15155 (FZO55_15155) sulA 3094408..3094917 (+) 510 WP_058690679.1 SOS-induced cell division inhibitor SulA -
  FZO55_RS15160 (FZO55_15160) ompA 3095273..3096328 (+) 1056 WP_014883252.1 porin OmpA -
  FZO55_RS15165 (FZO55_15165) matP 3096393..3096845 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  FZO55_RS15170 (FZO55_15170) - 3097032..3098792 (+) 1761 WP_047028048.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23941.60 Da        Isoelectric Point: 9.3304

>NTDB_id=384753 FZO55_RS15150 WP_058690680.1 3093564..3094190(-) (sxy/tfoX) [Enterobacter kobei strain EB_P8_L5_01.19]
MKKISYERIYQSQQYLSPLGEIHHRALFGGYTLAIDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERCQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARECWLKMRAKN
RALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQKNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=384753 FZO55_RS15150 WP_058690680.1 3093564..3094190(-) (sxy/tfoX) [Enterobacter kobei strain EB_P8_L5_01.19]
ATGAAAAAGATATCTTATGAACGGATTTATCAATCCCAGCAATACCTCTCACCGCTAGGAGAAATTCATCATCGCGCACT
GTTCGGTGGCTATACCCTGGCGATAGATGACGCGGTTTTTGCCATGGTGTCAGATGGCGAGCTGTACCTTCGCGCCTGTG
AAGAAAGCGCGAAATACTGTGTAAAAAATGCCGCCTCTTTTTTGACGCTGATGAAACGAGGCCGCCCGGTACTTCTCAAC
TATTACCGTGTCGATGATGGACTGTGGCAAGACAGGGAACGGCTGCTTCAGCTCTCCTCTTTCGCGCTCAATGCGGCGAG
GAAAGAGCGCTGTCAGCGCCATCAACGAAACCGGCTTAAAGATCTGCCAAACCTGACCTTTCAGCTTGAGGTATTGCTTT
TTGAAGCTGGCATTACTAACGAAGAGACGCTGCGGGCACTGGGTGCCAGGGAGTGCTGGTTAAAGATGCGGGCTAAAAAT
AGGGCACTCGGTATTAAAGTGCTCTTTGCCCTTGAGGGGGCTATTGAGGGTTTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGAAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(15-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

56.65

97.596

0.553

Multiple sequence alignment