Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | BAMF_RS26655 | Genome accession | NC_014551 |
| Coordinates | 1229342..1230295 (+) | Length | 317 a.a. |
| NCBI ID | WP_013351813.1 | Uniprot ID | A0AAP7TCS7 |
| Organism | Bacillus amyloliquefaciens DSM 7 = ATCC 23350 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1224342..1235295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMF_RS26630 (BAMF_1198) | argF | 1226150..1227106 (+) | 957 | WP_013351808.1 | ornithine carbamoyltransferase | - |
| BAMF_RS26635 (BAMF_1199) | - | 1227198..1227377 (+) | 180 | WP_013351809.1 | YjzC family protein | - |
| BAMF_RS26640 (BAMF_1200) | - | 1227418..1227606 (-) | 189 | WP_013351810.1 | YjzD family protein | - |
| BAMF_RS26645 (BAMF_1201) | - | 1227867..1228601 (+) | 735 | WP_013351811.1 | hypothetical protein | - |
| BAMF_RS26650 (BAMF_1202) | - | 1228682..1229248 (+) | 567 | WP_013351812.1 | hypothetical protein | - |
| BAMF_RS26655 (BAMF_1203) | med | 1229342..1230295 (+) | 954 | WP_013351813.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| BAMF_RS26660 (BAMF_1204) | comZ | 1230308..1230499 (+) | 192 | WP_013351814.1 | ComZ family protein | Regulator |
| BAMF_RS26665 (BAMF_1205) | - | 1230529..1230747 (-) | 219 | WP_013351815.1 | hypothetical protein | - |
| BAMF_RS26670 (BAMF_1206) | - | 1230913..1231851 (+) | 939 | WP_013351816.1 | beta-ketoacyl-ACP synthase III | - |
| BAMF_RS26675 (BAMF_1207) | fabF | 1231875..1233113 (+) | 1239 | WP_013351817.1 | beta-ketoacyl-ACP synthase II | - |
| BAMF_RS26680 (BAMF_1208) | - | 1233197..1233982 (+) | 786 | WP_013351818.1 | DUF2268 domain-containing protein | - |
| BAMF_RS26685 (BAMF_1209) | - | 1234155..1235141 (+) | 987 | WP_013351819.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35342.94 Da Isoelectric Point: 4.5494
>NTDB_id=38466 BAMF_RS26655 WP_013351813.1 1229342..1230295(+) (med) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE
Nucleotide
Download Length: 954 bp
>NTDB_id=38466 BAMF_RS26655 WP_013351813.1 1229342..1230295(+) (med) [Bacillus amyloliquefaciens DSM 7 = ATCC 23350]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATACGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCTTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGGTGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACGGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATACGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGACAAAGCTTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTTTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
78.549 |
100 |
0.785 |