Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   FLQ07_RS01105 Genome accession   NZ_CP043501
Coordinates   198746..201061 (-) Length   771 a.a.
NCBI ID   WP_035337589.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain A4-3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 193746..206061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FLQ07_RS01065 (FLQ07_01065) - 194211..194642 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  FLQ07_RS01070 (FLQ07_01070) - 194642..194983 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  FLQ07_RS01075 (FLQ07_01075) - 194976..196454 (+) 1479 WP_026580052.1 Na+/H+ antiporter subunit D -
  FLQ07_RS01080 (FLQ07_01080) - 196460..196936 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  FLQ07_RS01085 (FLQ07_01085) - 196936..197220 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  FLQ07_RS01090 (FLQ07_01090) mnhG 197204..197578 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  FLQ07_RS01095 (FLQ07_01095) - 197615..198004 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  FLQ07_RS01100 (FLQ07_01100) comA 198021..198659 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  FLQ07_RS01105 (FLQ07_01105) comP 198746..201061 (-) 2316 WP_035337589.1 ATP-binding protein Regulator
  FLQ07_RS01110 (FLQ07_01110) comX 201082..201252 (-) 171 WP_020452790.1 competence pheromone ComX -
  FLQ07_RS01115 (FLQ07_01115) - 201224..202135 (-) 912 WP_035337591.1 polyprenyl synthetase family protein -
  FLQ07_RS01120 (FLQ07_01120) degQ 202322..202462 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  FLQ07_RS01130 (FLQ07_01130) - 202948..203295 (+) 348 WP_223254849.1 hypothetical protein -
  FLQ07_RS01135 (FLQ07_01135) - 203338..204558 (-) 1221 WP_035337594.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 771 a.a.        Molecular weight: 89301.09 Da        Isoelectric Point: 7.0414

>NTDB_id=384632 FLQ07_RS01105 WP_035337589.1 198746..201061(-) (comP) [Bacillus paralicheniformis strain A4-3]
MKSYYNKVSLVLILLSFIYVLYVCYLSFNNNLVGLKVKNLDEYSLEVVEVKKHTLAADYAELKEGDIIHRINGQQVPFKK
DKEYTLSNVLTLTIERNGKVFENDSLIYLDLVSYDSFFIFIIPLIFYFLCLICVYFIFKVNKSKNLFSAFLLVLFLLITS
IAYVSAGAVARGDTFSRFVNILTFLAVPTSYLHFIYRYFKEIGKTFFSNKVFLLYLIPFINLILEAGLYLFEFEGSILKS
INLLSFFISTVIVFILITYALIKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQTIRTFTSLNQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGK
IVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMDHLEHVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLY
DLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYED
DGIGFDPDKLYQNSASMGLSGIRERVRALNGNLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2316 bp        

>NTDB_id=384632 FLQ07_RS01105 WP_035337589.1 198746..201061(-) (comP) [Bacillus paralicheniformis strain A4-3]
ATGAAGTCATATTATAACAAGGTTTCACTAGTTCTCATATTGTTAAGTTTTATTTATGTTCTCTATGTTTGCTATCTTAG
TTTTAATAATAATCTAGTTGGGTTAAAGGTGAAAAATCTTGATGAATACAGTCTTGAAGTTGTGGAAGTGAAAAAACACA
CTTTAGCCGCTGATTATGCAGAATTAAAAGAAGGAGATATCATTCATAGAATAAATGGGCAGCAGGTTCCATTTAAAAAA
GATAAGGAATATACATTGTCAAACGTTTTAACGTTAACAATTGAAAGAAATGGGAAAGTATTTGAGAATGATTCTCTGAT
ATATTTGGATTTAGTCAGTTATGACAGTTTTTTTATATTTATCATTCCGTTGATCTTTTACTTTTTATGTTTAATTTGTG
TGTATTTTATTTTTAAAGTAAACAAATCTAAAAATCTTTTCTCAGCATTTTTATTAGTCCTATTTCTGCTTATTACTTCT
ATAGCTTATGTTAGTGCAGGCGCAGTTGCAAGAGGTGACACTTTCAGTAGATTTGTAAATATACTTACTTTTTTAGCTGT
TCCAACTAGCTACTTACATTTTATTTATCGATACTTTAAAGAGATAGGGAAAACATTTTTCAGTAATAAAGTTTTTTTAC
TTTATTTAATACCATTTATAAACCTCATACTTGAAGCTGGTTTATACTTATTTGAATTTGAGGGAAGTATTCTAAAAAGC
ATTAACTTATTGTCGTTCTTTATTTCGACGGTCATTGTTTTTATTCTGATTACATATGCCTTAATTAAATTCAAGTATTC
TCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTTGTTTTTCTATGTACTTC
CTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGATTCCTTTATCTTTGGTA
TATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTATAGTTTTTTAGCGATAAT
TCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCACAGTACAGGTTACAATCT
TTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTCCGCTTTCGGCTAAAGCGCTTTTCAGAA
AAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTAAATCAAGTTTTAATGGA
GTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAACGATGGATCGGTATCGA
TGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCATCACCGACATCGGCAAA
ATCGTCGAAGTCGACCGAGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTTGTCGGT
TTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCCTGGAGA
ACGTCTTGAAAATCGGCGAGCTGATGGACCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCAGCGTGGCTGAATAAA
TTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACATGATTTC
CTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAAGGCTCA
TCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTGTTGTAC
GATCTTGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCGCCTCAA
TACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAAGCAATG
CGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTATGAAGAT
GACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGTATTCGCGAGCGAGTCCG
CGCGCTGAACGGCAATCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.29

100

0.536


Multiple sequence alignment