Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FZ025_RS15310 Genome accession   NZ_CP043476
Coordinates   3464677..3465078 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas hyacinthi strain CFBP 1156     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3459677..3470078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZ025_RS15295 (FZ025_15365) - 3461256..3462397 (+) 1142 WP_208803672.1 IS3 family transposase -
  FZ025_RS15300 (FZ025_15370) - 3462605..3463486 (-) 882 WP_046977630.1 energy transducer TonB -
  FZ025_RS15305 (FZ025_15375) gshB 3463483..3464433 (-) 951 WP_046977631.1 glutathione synthase -
  FZ025_RS15310 (FZ025_15380) pilG 3464677..3465078 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  FZ025_RS15315 (FZ025_15385) - 3465096..3465458 (+) 363 WP_046977632.1 response regulator -
  FZ025_RS15320 (FZ025_15390) - 3465460..3465990 (+) 531 WP_046977633.1 chemotaxis protein CheW -
  FZ025_RS15325 (FZ025_15395) - 3466031..3468067 (+) 2037 WP_046977634.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=384423 FZ025_RS15310 WP_003472648.1 3464677..3465078(+) (pilG) [Xanthomonas hyacinthi strain CFBP 1156]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=384423 FZ025_RS15310 WP_003472648.1 3464677..3465078(+) (pilG) [Xanthomonas hyacinthi strain CFBP 1156]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGGGTCATGGTGATCGATGACTCGAAGACGATCCGCCG
CACCGCCGAAACGTTGTTGAAGCGCGAGGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCCTTGGCCAAGATCG
CCGATCAGCAGCCGCAGATCATCTTCGTGGATATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGCTCCGAGCAGTACCTTACCAAGCCCTTCACACGCGAAGAGCTGCTGGGCGCGATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment