Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FZ924_RS10695 | Genome accession | NZ_CP043469 |
| Coordinates | 2213452..2213832 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 18WIARLN0021 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2208452..2218832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ924_RS10665 (FZ924_10710) | tadA | 2208570..2209073 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| FZ924_RS10670 (FZ924_10715) | - | 2209080..2210204 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FZ924_RS10675 (FZ924_10720) | ung | 2210201..2210914 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FZ924_RS10680 (FZ924_10725) | - | 2210965..2211561 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| FZ924_RS10685 (FZ924_10730) | gspK | 2211792..2212751 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| FZ924_RS10690 (FZ924_10735) | xcpW | 2212751..2213452 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FZ924_RS10695 (FZ924_10740) | xcpV | 2213452..2213832 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FZ924_RS10700 (FZ924_10745) | - | 2213822..2214376 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FZ924_RS10705 (FZ924_10750) | - | 2214386..2214994 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FZ924_RS10710 (FZ924_10755) | - | 2215032..2215805 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FZ924_RS10715 (FZ924_10760) | - | 2215823..2216164 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FZ924_RS10720 (FZ924_10765) | - | 2216176..2217156 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| FZ924_RS10725 (FZ924_10770) | kdsB | 2217168..2217929 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=384354 FZ924_RS10695 WP_000836911.1 2213452..2213832(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0021]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=384354 FZ924_RS10695 WP_000836911.1 2213452..2213832(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0021]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |