Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   HGO96_RS00220 Genome accession   NZ_CP051484
Coordinates   36275..36949 (+) Length   224 a.a.
NCBI ID   WP_054189202.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NGA71     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 31275..41949
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGO96_RS00195 (HGO96_03460) - 31484..32551 (+) 1068 WP_000980137.1 membrane protein -
  HGO96_RS00200 (HGO96_03465) - 32702..33745 (+) 1044 WP_054189197.1 alpha/beta hydrolase -
  HGO96_RS00205 (HGO96_03470) - 34075..34503 (+) 429 WP_054189199.1 hypothetical protein -
  HGO96_RS00210 (HGO96_03475) - 34717..35223 (-) 507 WP_054189200.1 GNAT family N-acetyltransferase -
  HGO96_RS00215 (HGO96_03480) graX 35336..36259 (+) 924 WP_054193624.1 auxiliary protein GraX/ApsX -
  HGO96_RS00220 (HGO96_03485) braR 36275..36949 (+) 675 WP_054189202.1 response regulator transcription factor GraR/ApsR Regulator
  HGO96_RS00225 (HGO96_03490) graS 36942..37982 (+) 1041 WP_054189203.1 histidine kinase GraS/ApsS -
  HGO96_RS00230 (HGO96_03495) vraF 38126..38887 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  HGO96_RS00235 (HGO96_03500) vraG 38877..40766 (+) 1890 WP_054189204.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26108.00 Da        Isoelectric Point: 4.4100

>NTDB_id=384302 HGO96_RS00220 WP_054189202.1 36275..36949(+) (braR) [Staphylococcus aureus strain NGA71]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFKPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=384302 HGO96_RS00220 WP_054189202.1 36275..36949(+) (braR) [Staphylococcus aureus strain NGA71]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAAACCAGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCCGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTCAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397


Multiple sequence alignment