Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   FZ921_RS14315 Genome accession   NZ_CP043458
Coordinates   3000504..3005024 (-) Length   1506 a.a.
NCBI ID   WP_000658900.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 18WIARLN0024     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2995504..3010024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZ921_RS14290 (FZ921_14385) - 2995968..2996111 (+) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  FZ921_RS14295 (FZ921_14390) dapE 2996237..2997370 (+) 1134 WP_001016580.1 succinyl-diaminopimelate desuccinylase -
  FZ921_RS14300 (FZ921_14395) - 2997508..2998389 (-) 882 WP_000022122.1 alpha/beta fold hydrolase -
  FZ921_RS14305 (FZ921_14400) - 2998397..2999806 (-) 1410 WP_000182192.1 coproporphyrinogen-III oxidase family protein -
  FZ921_RS14310 (FZ921_14405) - 3000043..3000507 (-) 465 WP_000678926.1 hypothetical protein -
  FZ921_RS14315 (FZ921_14410) chpA 3000504..3005024 (-) 4521 WP_000658900.1 Hpt domain-containing protein Regulator
  FZ921_RS14320 (FZ921_14415) - 3005171..3007249 (-) 2079 WP_000505927.1 methyl-accepting chemotaxis protein -
  FZ921_RS14325 (FZ921_14420) - 3007296..3007832 (-) 537 WP_000729762.1 chemotaxis protein CheW -
  FZ921_RS14330 (FZ921_14425) - 3007893..3008255 (-) 363 WP_000101096.1 PleD family two-component system response regulator -
  FZ921_RS14335 (FZ921_14430) pilG 3008279..3008662 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FZ921_RS14340 (FZ921_14435) - 3008945..3009583 (+) 639 WP_031949909.1 hypothetical protein -

Sequence


Protein


Download         Length: 1506 a.a.        Molecular weight: 171810.12 Da        Isoelectric Point: 4.3023

>NTDB_id=384265 FZ921_RS14315 WP_000658900.1 3000504..3005024(-) (chpA) [Acinetobacter baumannii strain 18WIARLN0024]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQFWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYIPDISNDLPQQDSTSFEPISNIEP
EPEVVATVENFSDSADWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPLPVVEAFDTESEIFSEQEVISEIIIDEIPVELEPALAELETHHDQVFDTAVTELATPVEMITTVTSQESEIA
ADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQLENAFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPPMM
GAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRMQRQQANKPETGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES
IYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQST
QRHKQLSEAVYRQRESDEHRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFLLGVSQYMGKPFQEEELLENIDVLLVASDSEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=384265 FZ921_RS14315 WP_000658900.1 3000504..3005024(-) (chpA) [Acinetobacter baumannii strain 18WIARLN0024]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAACTTGCGTGGACAGTCGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATTCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAAAGAGCACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGTCAACAACTACAACAACAGCAAAGTTTAGAACCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCGTTAGCCGAGCCAATCATTCA
AGCTACTCATACTGAAATTGAAATAAATCTAGATGAAACTTTGACCTTATTTATGGAAGAGGCAGAAGAACATTTAGCCA
CGATTCATCAATTTTTGGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGT
GGTAGTTCTGCAATGGCGCAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTGCTACA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATTTTGGGATGCATATGTTGAGCAA
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGCTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTATT
GGATGCAGAATTAGATTTTGAGAAGGGAATTCGTAATGAGTTTCCTGATTATCTTGAACGCCTAAGTGAACAGGCTGATT
TATTACTGCAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTTAAAGAAAGTTATGAAGTA
CTGCTTGATAAACCTGCGTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCACATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAGTACATTCCAGACATATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATCCAATATTGAACCA
GAGCCAGAAGTAGTAGCTACTGTAGAGAATTTCTCAGATTCTGCAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATTTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAATCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATCTATGAGCGTTTAATTCAAAAGCAATTAGTGGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGACCGTTTACAAATTATGCGTGAACAACAACTAGATTATGCAGCCCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTTTACCAGTGGTTGAGGCATTTGATACTGAAAGTGAGATATTCTCTGAGCAAGAGGT
GATATCTGAAATAATAATAGATGAGATACCAGTAGAACTTGAACCTGCTCTTGCAGAGCTAGAAACTCATCACGATCAGG
TATTCGATACAGCGGTTACCGAGTTAGCTACTCCAGTTGAGATGATTACCACGGTTACATCGCAAGAGAGTGAAATTGCA
GCTGATGAACAGGACATTGAGGCTGTTGTTGAACAGACGTTCCTAGAAGAAGCTACTGAATTGTTAGAAATGGCTGAGTC
GCTATTAAAACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAGCTTCAAAGAGCCGTGCACAGTTTAAAAG
GTGGTGCACGGATGGTGGGTTTAGAAGCCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGCTA
CATCACTTCAATTCGAATATTTATGATCATTTATTAGAAAGTGCGATTGCATGGTTAAAAGATGCAATTTTCAACCACAA
CTATCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGT
TAACTAGAGCGGACTTGTTTAGCTCAGAACCTGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATG
GGAGCGTGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTCTCAGCCGACTTAATCGAGAAAATGAT
TGATTTGTCTGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACTTAAGCCAATTTAGCCATACACTGGTTGAAA
TGGAGCTGGCGATTCAACGACTTGCCGATCAGTTGCGACGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACAT
GGAATTGAACATTCTCGTTATACTGACTTTGACCCATTAGAGATGGACCAATATTCATCTTTAAATCAATTGTCGAAATC
GCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAGATCAGAGATACCGAAAGTTTGCTTT
TACAACAATCAAGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCG
CGTTTACAACGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACGGAAGGTGA
GTTGGACCGCAATATTTTAGAACGGTTAGTGACTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAAG
ACCGAATGCAGCGGCAACAAGCAAATAAACCGGAAACAGGGCGTATTGAACTTAATATTCAGCGTCAAGGTACGGATGTT
GTGGTTGTCTTTAGTGATGATGGTCAAGGCATTGATGTTGAAAAAGTACGTCAGAAAGCACTCCTTGCCGGATTGATCAA
GCCAGAACAAGACTTAGAACAGCAAGACATACTGCAACTTATTTTCCATCCGGGTTTAAGTACAGCAGAGCAAGTCACTC
AGATTTCCGGACGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGTGGACATGTCAGCGTTGAATCC
ATCTATGGGCAGGGAACAACATTTACGATTCGCGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTGAAAGTGGC
TGATCAACAATTTGCGATTCCACTTGCTCAAATCGATCGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTG
AAAGTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCTGAATTTGTTGGTAACCAACCC
ATACCACGTTTAAATGGTGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACT
TGTTGACCAGTTAATTGGCTCTCGAGCACAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAATTG
CAGGCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCAACT
CAGCGTCATAAACAACTTAGTGAAGCAGTGTATAGACAACGAGAGTCTGATGAACACCGTCTCATCATGATTGTAGATGA
CTCAGTAACTGTACGTAAGGTCACGTCCCGATTACTTGAACGTCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTG
ATGCCATAGAACAGTTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAG
GTTCTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAAACA
TCGTGAACGAGCATTTTTGTTAGGTGTAAGTCAATATATGGGCAAACCTTTCCAGGAAGAAGAGTTACTAGAGAATATCG
ATGTTTTACTTGTAGCGTCTGACAGTGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.672

100

0.987


Multiple sequence alignment