Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FZ921_RS07510 | Genome accession | NZ_CP043458 |
| Coordinates | 1558474..1558854 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 18WIARLN0024 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1553474..1563854
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ921_RS07480 (FZ921_07535) | kdsB | 1554377..1555138 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FZ921_RS07485 (FZ921_07540) | - | 1555150..1556130 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| FZ921_RS07490 (FZ921_07545) | - | 1556142..1556483 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FZ921_RS07495 (FZ921_07550) | - | 1556501..1557274 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FZ921_RS07500 (FZ921_07555) | - | 1557312..1557920 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FZ921_RS07505 (FZ921_07560) | - | 1557930..1558484 (+) | 555 | WP_000841374.1 | type II secretion system protein | - |
| FZ921_RS07510 (FZ921_07565) | xcpV | 1558474..1558854 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FZ921_RS07515 (FZ921_07570) | xcpW | 1558854..1559555 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FZ921_RS07520 (FZ921_07575) | gspK | 1559555..1560514 (+) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| FZ921_RS07525 (FZ921_07580) | - | 1560744..1561340 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| FZ921_RS07530 (FZ921_07585) | ung | 1561391..1562104 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FZ921_RS07535 (FZ921_07590) | - | 1562101..1563225 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FZ921_RS07540 (FZ921_07595) | tadA | 1563232..1563735 (+) | 504 | WP_031954106.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=384260 FZ921_RS07510 WP_000836911.1 1558474..1558854(+) (xcpV) [Acinetobacter baumannii strain 18WIARLN0024]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=384260 FZ921_RS07510 WP_000836911.1 1558474..1558854(+) (xcpV) [Acinetobacter baumannii strain 18WIARLN0024]
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |