Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FZ920_RS10745 | Genome accession | NZ_CP043455 |
| Coordinates | 2207589..2207969 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 18WIARLN0025 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2202589..2212969
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ920_RS10715 (FZ920_10740) | tadA | 2202707..2203210 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| FZ920_RS10720 (FZ920_10745) | - | 2203217..2204341 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FZ920_RS10725 (FZ920_10750) | ung | 2204338..2205051 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FZ920_RS10730 (FZ920_10755) | - | 2205102..2205698 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| FZ920_RS10735 (FZ920_10760) | gspK | 2205929..2206888 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| FZ920_RS10740 (FZ920_10765) | xcpW | 2206888..2207589 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FZ920_RS10745 (FZ920_10770) | xcpV | 2207589..2207969 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FZ920_RS10750 (FZ920_10775) | - | 2207959..2208513 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FZ920_RS10755 (FZ920_10780) | - | 2208523..2209131 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FZ920_RS10760 (FZ920_10785) | - | 2209169..2209942 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FZ920_RS10765 (FZ920_10790) | - | 2209960..2210301 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FZ920_RS10770 (FZ920_10795) | - | 2210313..2211293 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| FZ920_RS10775 (FZ920_10800) | kdsB | 2211305..2212066 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=384212 FZ920_RS10745 WP_000836911.1 2207589..2207969(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0025]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=384212 FZ920_RS10745 WP_000836911.1 2207589..2207969(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0025]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |