Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FZ919_RS10740 | Genome accession | NZ_CP043452 |
| Coordinates | 2218167..2218547 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 18WIARLN0035 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2213167..2223547
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FZ919_RS10710 (FZ919_10755) | tadA | 2213285..2213788 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| FZ919_RS10715 (FZ919_10760) | - | 2213795..2214919 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FZ919_RS10720 (FZ919_10765) | ung | 2214916..2215629 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FZ919_RS10725 (FZ919_10770) | - | 2215680..2216276 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| FZ919_RS10730 (FZ919_10775) | gspK | 2216507..2217466 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| FZ919_RS10735 (FZ919_10780) | xcpW | 2217466..2218167 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FZ919_RS10740 (FZ919_10785) | xcpV | 2218167..2218547 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FZ919_RS10745 (FZ919_10790) | - | 2218537..2219091 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FZ919_RS10750 (FZ919_10795) | - | 2219101..2219709 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FZ919_RS10755 (FZ919_10800) | - | 2219747..2220520 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FZ919_RS10760 (FZ919_10805) | - | 2220538..2220879 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| FZ919_RS10765 (FZ919_10810) | - | 2220891..2221871 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| FZ919_RS10770 (FZ919_10815) | kdsB | 2221883..2222644 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=384164 FZ919_RS10740 WP_000836911.1 2218167..2218547(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0035]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=384164 FZ919_RS10740 WP_000836911.1 2218167..2218547(-) (xcpV) [Acinetobacter baumannii strain 18WIARLN0035]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |