Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   HGO93_RS03755 Genome accession   NZ_CP051482
Coordinates   735385..736008 (+) Length   207 a.a.
NCBI ID   WP_001208760.1    Uniprot ID   Q93SM0
Organism   Staphylococcus aureus strain NGA104a     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 730385..741008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGO93_RS03725 (HGO93_06615) - 731360..731827 (-) 468 WP_000966142.1 CcdC family protein -
  HGO93_RS03730 (HGO93_06610) - 731921..732019 (-) 99 WP_001789897.1 hypothetical protein -
  HGO93_RS03735 (HGO93_06605) - 732006..732248 (-) 243 WP_000246909.1 YneF family protein -
  HGO93_RS03740 (HGO93_06600) recP/tkt 732526..734514 (-) 1989 WP_000481443.1 transketolase Machinery gene
  HGO93_RS03745 (HGO93_06595) - 734635..734873 (-) 239 Protein_707 DUF896 domain-containing protein -
  HGO93_RS03750 (HGO93_06590) sosA 735009..735242 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  HGO93_RS03755 (HGO93_06585) dinR/lexA 735385..736008 (+) 624 WP_001208760.1 transcriptional repressor LexA Regulator
  HGO93_RS03760 (HGO93_06580) - 736388..737404 (-) 1017 WP_168989892.1 CAP domain-containing protein -
  HGO93_RS03770 (HGO93_06570) guaC 737426..738403 (-) 978 WP_000688122.1 GMP reductase -
  HGO93_RS03775 (HGO93_06565) rpsN 738560..738829 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  HGO93_RS03780 (HGO93_06560) rpmG 739283..739432 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23301.46 Da        Isoelectric Point: 4.8811

>NTDB_id=384159 HGO93_RS03755 WP_001208760.1 735385..736008(+) (dinR/lexA) [Staphylococcus aureus strain NGA104a]
MRELTKRQSEIYNYIKQVVQTKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=384159 HGO93_RS03755 WP_001208760.1 735385..736008(+) (dinR/lexA) [Staphylococcus aureus strain NGA104a]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAACGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTAGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q93SM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment