Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | FY536_RS06410 | Genome accession | NZ_CP043431 |
| Coordinates | 1303080..1304885 (+) | Length | 601 a.a. |
| NCBI ID | WP_006845241.1 | Uniprot ID | A0A7H1MN57 |
| Organism | Weissella koreensis strain SK | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1298080..1309885
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FY536_RS06380 (FY536_06360) | - | 1298746..1299588 (+) | 843 | WP_006845235.1 | YitT family protein | - |
| FY536_RS06385 (FY536_06365) | - | 1299637..1300386 (+) | 750 | WP_006845236.1 | DnaD domain protein | - |
| FY536_RS06390 (FY536_06370) | - | 1300406..1300909 (+) | 504 | WP_006845237.1 | MscL family protein | - |
| FY536_RS06395 | - | 1300955..1301098 (+) | 144 | WP_006845238.1 | hypothetical protein | - |
| FY536_RS06400 (FY536_06375) | - | 1301162..1301881 (+) | 720 | WP_006845239.1 | adaptor protein MecA | - |
| FY536_RS06405 (FY536_06380) | - | 1302002..1303060 (+) | 1059 | WP_341456506.1 | competence protein CoiA family protein | - |
| FY536_RS06410 (FY536_06385) | pepF | 1303080..1304885 (+) | 1806 | WP_006845241.1 | oligoendopeptidase F | Regulator |
| FY536_RS06415 (FY536_06390) | glyQ | 1305235..1306161 (+) | 927 | WP_006845243.1 | glycine--tRNA ligase subunit alpha | - |
| FY536_RS06420 (FY536_06395) | glyS | 1306163..1308235 (+) | 2073 | WP_104914670.1 | glycine--tRNA ligase subunit beta | - |
| FY536_RS06425 (FY536_06400) | - | 1308429..1308860 (+) | 432 | WP_006845245.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| FY536_RS06430 (FY536_06405) | - | 1308964..1309503 (+) | 540 | WP_006845246.1 | NADPH-dependent FMN reductase | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 68219.99 Da Isoelectric Point: 4.1831
>NTDB_id=384039 FY536_RS06410 WP_006845241.1 1303080..1304885(+) (pepF) [Weissella koreensis strain SK]
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEKDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAEQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEKDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAEQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
Nucleotide
Download Length: 1806 bp
>NTDB_id=384039 FY536_RS06410 WP_006845241.1 1303080..1304885(+) (pepF) [Weissella koreensis strain SK]
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCTCGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTACCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCCTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAGCCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTCA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAAAAGGATGCAAGCGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAGAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCTCGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTACCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCCTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAGCCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTCA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAAAAGGATGCAAGCGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAGAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
54.899 |
98.502 |
0.541 |