Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FZE25_RS05995 Genome accession   NZ_CP043416
Coordinates   1127675..1127866 (+) Length   63 a.a.
NCBI ID   WP_042635050.1    Uniprot ID   -
Organism   Bacillus velezensis strain ONU 553     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1122675..1132866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FZE25_RS05960 (FZE25_05855) argF 1123527..1124498 (+) 972 WP_007409130.1 ornithine carbamoyltransferase -
  FZE25_RS05965 (FZE25_05860) - 1124574..1124753 (+) 180 WP_003155070.1 YjzC family protein -
  FZE25_RS05970 (FZE25_05865) - 1124790..1124975 (-) 186 WP_007409129.1 YjzD family protein -
  FZE25_RS05980 (FZE25_05870) - 1125236..1125970 (+) 735 WP_007409127.1 hypothetical protein -
  FZE25_RS05985 (FZE25_05875) - 1126053..1126619 (+) 567 WP_007409126.1 hypothetical protein -
  FZE25_RS05990 (FZE25_05880) med 1126709..1127662 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  FZE25_RS05995 (FZE25_05885) comZ 1127675..1127866 (+) 192 WP_042635050.1 ComZ family protein Regulator
  FZE25_RS06000 (FZE25_05890) - 1127895..1128113 (-) 219 WP_007409123.1 hypothetical protein -
  FZE25_RS06005 (FZE25_05895) - 1128280..1129218 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  FZE25_RS06010 (FZE25_05900) fabF 1129241..1130479 (+) 1239 WP_149061652.1 beta-ketoacyl-ACP synthase II -
  FZE25_RS06015 (FZE25_05905) - 1130562..1131347 (+) 786 WP_020955630.1 DUF2268 domain-containing protein -
  FZE25_RS06020 (FZE25_05910) - 1131521..1132507 (+) 987 WP_129004056.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7167.26 Da        Isoelectric Point: 4.2259

>NTDB_id=383667 FZE25_RS05995 WP_042635050.1 1127675..1127866(+) (comZ) [Bacillus velezensis strain ONU 553]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSLELIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=383667 FZE25_RS05995 WP_042635050.1 1127675..1127866(+) (comZ) [Bacillus velezensis strain ONU 553]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTTTGGAATTGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778

Multiple sequence alignment